Acetivibrio saccincola: HVS_12020
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Entry
HVS_12020 CDS
T05223
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HVS_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_12020
Enzymes [BR:
hsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HVS_12020
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HVS_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Vps27_GAT-like
Motif
Other DBs
NCBI-ProteinID:
AUG58286
UniProt:
A0A2K9E9H5
LinkDB
All DBs
Position
complement(2634766..2635332)
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AA seq
188 aa
AA seq
DB search
MTMYDWEELTNTCKNCKKCRLSNMRKNVVIERGNRNAPLMLIGEGPGEQEDIQGRPFVGR
AGKLLDLLLDALMIKEHQYYITNIVKCRPPGNRVPSEDEAQTCLPYLRNQVFLVKPKIIV
CLGATAMKYVIDRDARISQIRGCWIERKGYWMMPVFHPAALLRDESKKVLMWEDFKKVKQ
RLDTICQS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtatgactgggaagaattaacaaatacatgcaaaaattgcaaaaagtgccgt
ctaagtaacatgagaaaaaatgtagttatagaaagaggaaacaggaatgctcccctaatg
cttattggggaaggaccaggagagcaggaggatattcagggacggccgtttgtggggcgt
gcaggcaagcttttggatttgctgctggatgcactaatgataaaagagcatcaatactat
attacaaatatagtaaaatgcagaccccccggaaacagggttcctagtgaagatgaagcc
cagacatgtttaccttatttgagaaaccaggtttttttggtaaaacccaaaataatagtt
tgtctgggtgccactgctatgaaatatgtcatagacagagatgctcggatatcccagata
agaggttgctggattgaaagaaaggggtactggatgatgcctgtttttcatccggcggcg
cttcttagggacgagtctaagaaagttttaatgtgggaagattttaaaaaagttaaacaa
aggttggataccatatgtcaaagctag
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