Acetivibrio saccincola: HVS_12210
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Entry
HVS_12210 CDS
T05223
Symbol
lcfB3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc00061
Fatty acid biosynthesis
hsc00071
Fatty acid degradation
hsc01100
Metabolic pathways
hsc01212
Fatty acid metabolism
hsc02024
Quorum sensing
hsc04146
Peroxisome
Module
hsc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HVS_12210 (lcfB3)
00071 Fatty acid degradation
HVS_12210 (lcfB3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HVS_12210 (lcfB3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HVS_12210 (lcfB3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hsc01004
]
HVS_12210 (lcfB3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsc04147
]
HVS_12210 (lcfB3)
Enzymes [BR:
hsc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HVS_12210 (lcfB3)
Lipid biosynthesis proteins [BR:
hsc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HVS_12210 (lcfB3)
Exosome [BR:
hsc04147
]
Exosomal proteins
Exosomal proteins of breast milk
HVS_12210 (lcfB3)
Exosomal proteins of breast cancer cells
HVS_12210 (lcfB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AUG58319
UniProt:
A0A2K9E4J6
LinkDB
All DBs
Position
complement(2675531..2677030)
Genome browser
AA seq
499 aa
AA seq
DB search
MNYCDFLYDSIDKYIDNEAIVDLEKDERLTFGELKDAVIKVADFLVSKGYKPGMVIATHL
NNGAEAAIALLAIQYIGCVICLIDPLYKADELPYYIKDSGASLIFTHLDKESVKKVYQGE
VEIFEEGDIRRIYKNTQSIDKEPGMYKFDKDELAMLLYTSGSTSAPKAVMLSTGCYYTFL
EKSDMRMYQYTEEDRLLCFVPFSHGFGSISLLIPSLAHKAALVFLKSFHPIKVVEAIEKE
NITHIYGVPTHYMQLLRYEQGIEKLKKLKAAFCAAAPLSSETAIQWKEKVGIYLDEGYGL
SETCTLIATRISKLPDVSGNVGFPPTGILEVDVVDENGQVVEDGAIGELRVRGRGLMLGY
YNRPEETAERLRDGCVYTGDLGYKKEDGSYVVCGRKTEFINVAGLKISPIEVESALNSHP
NVVDSAAIGISDPLYGEVVKAYVVIEDGADVKERDLIRYLSGKIANFKIPKTIEFIDVIP
RNNVGKIDKKALKNRESLK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgaattactgtgatttcttatatgatagtattgataaatatattgataacgaagcaatt
gttgatttagaaaaagatgaaagacttacattcggggagcttaaagatgcggtcataaag
gtagcggattttctagtatcaaaaggatataagccgggaatggttatagcaacacatcta
aataacggtgctgaagctgccattgctttattggcaattcagtacataggatgtgttata
tgccttattgaccctttatacaaagcagatgagcttccttattatataaaggactccgga
gcgtcattaatatttacacatttagataaggaaagtgttaaaaaagtataccagggggaa
gttgaaatatttgaggaaggagatataaggcggatttataaaaacactcaaagcattgac
aaagaaccaggtatgtataaatttgacaaagacgaacttgcaatgcttctttatacttca
gggtcaacatcagccccaaaggcggttatgctttctacagggtgttactatacattctta
gaaaaaagcgacatgagaatgtatcaatatacagaagaggacaggctcctttgctttgta
cccttttcccatggctttggttcaatatcactgcttattccttccctggcacataaggcg
gctcttgtgtttttaaaatcttttcatcctataaaagtggttgaggcaatagaaaaggaa
aatataacacatatctacggtgttcccacacactatatgcagcttttaaggtatgagcag
ggaatagaaaaacttaaaaagctaaaggcggcattttgtgcagctgcgccgttaagttct
gagacagccatacagtggaaggaaaaggtgggcatatatttagatgagggatatggcctg
tcggaaacttgtactttaatagccacaagaatatcaaagcttccggatgtttcaggtaat
gtgggctttccacctacagggatactggaggtagatgtggtggatgaaaacgggcaggtg
gtggaagacggagccataggagagttaagggtcaggggaagaggtttgatgcttggatat
tacaaccgtccggaagagacagctgagaggctaagggatggatgtgtatatacaggggat
ttaggttacaaaaaagaagacggctcttatgttgtatgcggcaggaaaacagagtttata
aatgttgcaggtttaaaaatttccccaatagaagttgagtcagcattaaattcccatcca
aatgttgttgattcagcagctatcggtatcagcgacccgctttatggtgaggttgtaaag
gcatatgttgtcatagaagatggtgcggatgttaaagaaagggatttaatacggtatctt
tccggaaaaattgcaaattttaaaattccaaaaaccattgaatttattgatgtgatacca
agaaacaatgtaggaaaaatagacaagaaagcactgaaaaacagggaaagcctaaaataa
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