Acetivibrio saccincola: HVS_14005
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Entry
HVS_14005 CDS
T05223
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hsc
Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsc03009
]
HVS_14005 (rlmCD)
Enzymes [BR:
hsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HVS_14005 (rlmCD)
Ribosome biogenesis [BR:
hsc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HVS_14005 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Cons_hypoth95
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Methyltransf_11
PrmA
N6_N4_Mtase
DOT1
Ubie_methyltran
UPF0020
PCMT
Methyltransf_12
NARF
FtsJ
TehB
Methyltransf_32
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AUG58664
UniProt:
A0A2K9EEV2
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Position
complement(3085515..3086867)
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AA seq
450 aa
AA seq
DB search
MIPIKKNEIHTVKINGITHDGLGVGRIYNFTVFVDGAIENEEVEIKIIKLYKSYGIGKLM
KIITPSPDRVVPFCEVYKRCGGCGLQHMSSEAGLRFKENLVRENLKRIGKLEDVEVYDII
SMEEPFRYRNKAQYPVGMKKGEVQIGFYAKRSHDIIEGQACGIQHKLADKVKTIVKKYII
ENNVSVYDETTGKGLVRHVMTRVGFKTGEVMVVLVLNGENLPKKDVLIDALISEVPEIKS
IVVNVNREKTNVILGNKNIVIYGKGSITDYIGKYKFNISPNSFFQVNPVQTEVLYNKVLE
YAGLTQNEVVFDLYCGIGTISLFLSRKAKKVYGIEVVEEAIEDAKENARINGIGNVEFIL
GEVEKVLPGMGIKADVVVVDPPRKGCDENLLETLVKMKPSRIVYVSCNPSTLARDLRYLS
EGGFKVEKVQPVDMFPWTQHVECVVLMSRL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgataccgataaagaaaaatgaaattcatactgtaaaaataaacgggataactcatgac
ggtctgggtgttgggagaatatataattttactgtatttgtagacggggcaattgagaat
gaagaagtggaaattaaaattataaagctgtataaaagttatgggatagggaagctgatg
aaaataataaccccttcacctgacagggttgtgcctttttgtgaagtgtataaaagatgc
ggcggatgcggtctacagcacatgagtagtgaagcaggactaagatttaaggaaaatctt
gtaagggaaaatttaaagaggatagggaagcttgaagacgtagaagtatacgatataatt
tctatggaggagccttttagatatagaaacaaagcccagtacccggtgggaatgaaaaag
ggtgaagtacagataggcttttatgccaagaggtcccatgatatcattgaggggcaggca
tgtggaatccagcataagttagcagataaagtaaagacaattgttaaaaagtatattata
gaaaataatgtgagtgtgtatgatgaaaccacgggtaaaggcctggtacgccacgttatg
accagggtaggatttaaaaccggggaagtgatggtggttttggttttaaacggggagaac
ttgcctaaaaaagacgtactgattgatgctttaataagtgaagttccagaaataaagagc
attgttgtaaatgtaaacagggaaaagacaaatgttattttagggaataaaaatattgtt
atttacgggaaaggcagcattacagattatataggaaagtataaatttaatatatccccc
aactcttttttccaggtaaaccctgttcaaacggaagttttgtacaataaagtccttgaa
tatgcagggctgacccaaaatgaagttgtttttgacctttactgcggcattggcacgata
tcactgtttttatcccgaaaggcaaagaaggtttacgggattgaagttgtggaagaggca
atagaggatgcaaaggaaaatgcccgtatcaacggcattggcaatgtggaatttatttta
ggtgaggtggagaaggttttgccggggatgggtataaaggcagatgtggttgtagtggac
cctccaagaaagggatgtgatgaaaatcttcttgagacgctggtaaaaatgaagccctct
aggattgtatatgtgtcgtgcaatccgtcaacccttgcaagggatttgagatacttaagt
gaagggggatttaaggtagaaaaagtgcagccggtggacatgtttccctggacacagcat
gtggagtgtgtagtattgatgtcaaggctgtaa
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