Acetivibrio saccincola: HVS_15425
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Entry
HVS_15425 CDS
T05223
Symbol
sigF3
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
hsc
Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsc03021
]
HVS_15425 (sigF3)
Transcription machinery [BR:
hsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HVS_15425 (sigF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_23
GerE
HTH_28
HTH_24
HTH_11
MarR
KORA
Sigma70_ECF
HTH_17
HTH_50
HTH_Tnp_ISL3
NirdL-like_HTH
HTH_37
HTH_AraC
HTH_31
Phage_antitermQ
DUF1492
MarR_2
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AUG58926
UniProt:
A0A2K9EAZ2
LinkDB
All DBs
Position
complement(3381056..3381787)
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AA seq
243 aa
AA seq
DB search
MENNTESAMFLKYQETRDVNIRNEIVNEYLYLAEIIAKKFINRGVDYEDLYQVASIALIK
AVERFNPEKGVKFVSFATPTIVGEIKRFFRDKASVIRIPRRIYEEYKKVNYARDNLTQKL
GRPPRIDEIAKHLNISEETVIEIIESNNAYNIQSFDQNVYTDENFEFHEAIGEEDSTFER
VENRDFLVKSLNKFNETERDFINMRYFNSKTQKEIAEKLGVSQMYVSRLEKKVLNKFRTI
LEK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataacacagagagtgctatgtttttaaaatatcaagaaacaagggatgttaat
ataagaaatgaaatagtaaatgaatatctttatttagcagaaataattgcaaagaagttt
ataaacaggggagtggattatgaggacttgtatcaggtcgcgtctattgccttgattaaa
gctgttgagagatttaaccctgaaaaaggtgttaagtttgtcagctttgcaaccccgaca
attgttggtgagataaaaaggtttttcagggacaaagcatcagttatacggattcccagg
aggatttatgaagaatacaagaaggtaaattatgcaagagataatctgacacagaaacta
ggcagacctccacgcattgatgaaatagcaaagcatttaaatattagtgaagaaacagta
atagaaataatagagtctaataatgcttataatatccagtcttttgatcaaaatgtatat
acagatgaaaattttgaatttcatgaagctataggggaagaggattctacatttgaaagg
gtagaaaaccgtgactttttagtaaaaagtctaaacaaatttaatgaaacagagagagat
ttcattaacatgagatattttaacagcaaaacccagaaagaaatagcagaaaagctggga
gtatctcaaatgtatgtatcaagactagaaaagaaagtattaaataaattcaggactata
ttagagaaataa
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