Acetivibrio saccincola: HVS_15475
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Entry
HVS_15475 CDS
T05223
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HVS_15475 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsc03019
]
HVS_15475 (groL)
03110 Chaperones and folding catalysts [BR:
hsc03110
]
HVS_15475 (groL)
03029 Mitochondrial biogenesis [BR:
hsc03029
]
HVS_15475 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsc04147
]
HVS_15475 (groL)
Enzymes [BR:
hsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HVS_15475 (groL)
Messenger RNA biogenesis [BR:
hsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HVS_15475 (groL)
Chaperones and folding catalysts [BR:
hsc03110
]
Heat shock proteins
HSP60 / Chaperonin
HVS_15475 (groL)
Mitochondrial biogenesis [BR:
hsc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HVS_15475 (groL)
Exosome [BR:
hsc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HVS_15475 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HVS_15475 (groL)
Exosomal proteins of breast cancer cells
HVS_15475 (groL)
Exosomal proteins of colorectal cancer cells
HVS_15475 (groL)
Exosomal proteins of bladder cancer cells
HVS_15475 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AUG58936
UniProt:
A0A2K9EAZ9
LinkDB
All DBs
Position
complement(3392029..3393654)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFCEDARKALENGVNKLADTVKVTLGPKGRNVVLDKKFGTPLITNDGVTIAKEIE
LEDQFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMILKKGIE
KAVDKAVEGIKEISQKVKGKEDITRVASISANDDVIGNLIADAMEKVTNDGVITVEESKT
MGTNLEVVEGMQFDRGYVSPYMVTDTEKMEAILEDPYILITDKKITNVQDILPLLEQIVQ
QGKKLVIIAEDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKAMLEDIAILTGGQVIT
EELGLDLKDAKIEQLGRARQVKVQKENTIIVDGAGKQDEIQKRIASIKAQIEETTSEFDK
EKLQERLAKLSGGVAVIQVGAATETEMKEKKLRIEDALAATRAAVEEGIVSGGGTALINV
IPKVEELLDATSGDEKTGVQIVLRALEEPVRQIAENAGLEGSVIVEKVKASEKGIGYDVL
TDKYVNMIESGIVDPAKVTRSALQNAASIAAMVLTTEAVVSELPEKENPMAGAPGGMGGM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaaattctgtgaagacgctagaaaagcattggaaaacggtgtaaat
aaattggcagataccgtgaaagttacacttggacctaagggaagaaatgttgtattagat
aaaaaatttggtactcctctaattacaaatgacggggttacaattgcaaaggaaatagaa
ttggaagaccagtttgaaaatatgggtgcgcagctggttaaagaagttgcaacaaaaact
aacgatgtagcaggagacggtactactacagcaacacttcttgcacaggctattataaga
gaaggtcttaaaaacgtagctgcaggtgcaaacccaatgatacttaaaaaaggaatagaa
aaagcagtagataaagctgttgagggaataaaagaaatcagccagaaagtaaaaggaaaa
gaagatataacaagggttgcttcaatttccgctaatgatgatgttattggaaaccttata
gctgacgctatggaaaaggttacaaatgacggtgttatcactgttgaagaatccaagaca
atgggaacaaacttagaagttgttgagggtatgcagtttgacagaggttatgtatcccct
tacatggtaacagacactgaaaagatggaagcaatcttagaagatccatacatcttaatt
acagacaagaagattacaaatgttcaagacattcttcctctactagagcaaatagtacag
cagggcaaaaagcttgttataattgctgaagacgttgaaggcgaagctttggctacttta
gtggttaacaaattaagaggaacatttacatgtgttgcagtaaaagctcctggctttgga
gacagaagaaaagctatgttagaagatattgcaattctaacaggcggtcaggtaattact
gaagagttaggacttgacttaaaagacgcaaaaattgaacagctaggaagggcaagacaa
gtaaaagtacaaaaagaaaatactataattgttgacggtgcaggaaaacaagatgaaatt
caaaagagaattgcatcaataaaagcacagattgaagaaactacttcagaatttgacaag
gaaaaattacaagaaagacttgctaagctttcaggcggcgtagcagttatacaagttggt
gctgcaacagaaactgaaatgaaagaaaagaaattgagaattgaagacgcacttgcagca
accagggctgctgttgaagaaggtatagtatcaggcggcggaactgctcttataaatgtt
ataccaaaagtagaagaactattagacgcaacttcaggggacgaaaaaacaggtgttcaa
atagttttaagagcattagaagagcctgttagacagattgcagaaaatgcaggacttgaa
ggttcagttatagttgaaaaagttaaagctagtgaaaaaggcataggatatgacgtatta
actgataaatacgttaatatgattgaatcaggtatagttgaccctgcaaaagttacaaga
tctgctcttcaaaatgctgcgtccatagctgcaatggttcttacaactgaagctgttgtt
tcagaattacctgaaaaagaaaatccaatggcgggagcaccaggcggaatgggcggaatg
tactaa
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