Herbinix luporum: SD1D_0026
Help
Entry
SD1D_0026 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K18940
two-component system, OmpR family, sensor histidine kinase ArlS [EC:
2.7.13.3
]
Organism
hsd
Herbinix luporum
Pathway
hsd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD1D_0026
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsd01001
]
SD1D_0026
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hsd02022
]
SD1D_0026
Enzymes [BR:
hsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SD1D_0026
Protein kinases [BR:
hsd01001
]
Histidine kinases
OmpR family
SD1D_0026
Two-component system [BR:
hsd02022
]
OmpR family
ArlS-ArlR (virulence regulation)
SD1D_0026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_3
HAMP
TFIID-18kDa
AAA_15
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
CUH91589
UniProt:
A0A0K8J2F9
LinkDB
All DBs
Position
I:22031..23461
Genome browser
AA seq
476 aa
AA seq
DB search
MSWDNFLETIRRILVKIILPIRKKREEFLSNFRLSIMFRISMGYLKLLITHGLLLMFGIF
LIFMYAEKENFSDMANDIITSFKEEDESAYINPYYMQGLSMKLLDINTNEEVYNDIAYLP
ASDKAFFHGIHFDTKSDKNILVINEDKEFTTEKSSYIATFQYDLTGSYRSFLSMLWKLIV
LYIIIVVLIIKKGRKSDEKLFEPIRIMSATANRLTVHNLHSERLNVEGTQNELKDLANVI
NEMLDRIETSYESQKQFVSDASHELRTPIAVIQGYANLLDRWGSENKEVLAESIEAIQNE
SRSMQDLVEKLLFLSRHDKKTLKLIKKRFNMRPMVEDMIKETKLTTPNRIINSPILEDVV
VYGDKQALKQAIRIFIDNAIKYSNDGDEITILCENQNGDCVITVKDTGIGMTRKDVEHIF
DRFYRSDYVRNHNISGHGLGLSLAKLIILAHIGKIKVRTQFTKGTSFIITIPNRKF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggacaattttttagagactatacgtagaatattggttaagattatccttcca
attcggaaaaaaagagaggaatttctgagcaattttaggttgtcaataatgtttaggata
tcaatgggatatttgaaacttcttattacccatggacttttacttatgtttggaatattc
cttatctttatgtatgctgaaaaagaaaattttagtgatatggctaatgatataattact
tctttcaaagaagaggatgaaagtgcatatattaatccctattatatgcaagggctttcc
atgaagcttcttgatataaatactaatgaagaggtttataatgatattgcatatcttccc
gcttctgacaaggctttttttcatggaatacattttgatactaaaagtgataagaatata
ttagtaataaatgaagataaagaatttaccactgaaaaatcctcttatatagctactttt
cagtatgatttaacaggaagctatagaagctttctatccatgctatggaaacttatagtt
ctttatattattatcgttgtgctgataataaaaaaaggaagaaaaagtgatgaaaaatta
tttgaacccattagaattatgtcagcaacagcaaatcgcttgacagtccataatctgcat
agtgaaagattaaatgtagaaggtactcaaaatgaattaaaagatctggctaatgtaatt
aatgaaatgctagataggatagaaacttcttatgagagtcaaaagcaatttgtctcagat
gcctcccatgaacttagaacccctattgcagttatacaaggatatgctaatttactagac
cgctggggaagtgaaaataaagaagtattggccgaatcaattgaagctatacaaaatgaa
tcccggtctatgcaggatctggtagaaaagctgctctttttatcaaggcatgataaaaaa
accttaaagctgattaagaagcgttttaatatgaggcctatggtagaggatatgataaaa
gaaactaagcttaccacccctaaccgaataataaatagtcccatattagaagatgttgtg
gtatatggggacaagcaggctttaaaacaggcaattcgaatatttattgataatgcaata
aaatattcaaatgatggagatgaaataaccatcctatgtgaaaatcaaaacggtgactgc
gtaataaccgtaaaagataccggtataggtatgacccgaaaggatgttgaacatattttt
gatagattttacagatctgattatgtaagaaatcataatattagcggccatggactgggt
ctgtcccttgccaaattaattattctggcccatataggaaaaattaaagtccgaacccaa
tttaccaagggaaccagctttattataaccataccaaatagaaagttttaa
DBGET
integrated database retrieval system
