Herbinix luporum: SD1D_0028
Help
Entry
SD1D_0028 CDS
T04072
Name
(GenBank) putative membrane protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0028
Transporters [BR:
hsd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SD1D_0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_18
DUF2304
AAA_29
DUF5654
Motif
Other DBs
NCBI-ProteinID:
CUH91591
UniProt:
A0A0K8J1Q5
LinkDB
All DBs
Position
I:complement(25285..27033)
Genome browser
AA seq
582 aa
AA seq
DB search
MNKLSYYLKKYWYAYAFALLCTIIAVVLDMVSPQVTKNIIDKVIIEGKTDLLFSLLSMIL
FIGLGRAVFTYVKELIFDTVSSKIGSQLRKRLFTHIQGLSISFFDENNTGELMSRVKDDV
DRIWAATGYVSMLIFEVTIHTGIALFFMYRESASLAIIPTIVLPIVGGLAILMENKLGKI
YENISEQNAKLNTVAQENLAGVRTVKAFAREKFEINKFLSHNKQYYDLNMKQSKVFIKLY
PYFQLITKLLPMFVILFGGRQVIRGEISLGTLGAFTEYSMNIVWPMEMLGWLSNDLAAAF
ASYKRIRKIFAEEAKITEPENPVILDEVKGSVEFNQVSFNLNGNDILTDISFKLEAGKTI
GIMGTTGAGKSSIINLLQRFYDASQGEILLDGVNIKDLSLKQLRGSISLVMQDVFLFSDT
INENVKLGKRPWVKQEEVIEAAHYSQASEFIERMDDGYDTIIGERGVGLSGGQKQRISIA
RALAKKTPILVLDDSTSALDMETEHLIQKSLTDIKATKIIIAHRISAVRNADEIIILENG
KIKERGTHETLLKEKGYYYQTYQAQYGDYISDSGNREVTTCL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattgtcttattatctaaagaaatactggtatgcctatgcctttgccctactg
tgtaccataatagctgtagtcttggatatggtatcaccacaagtcactaaaaacatcata
gataaggtaatcatagaaggaaaaaccgatctgcttttctccttattatctatgatatta
tttattggactgggaagagctgtgtttacctatgttaaggagcttatttttgataccgtt
agttcaaaaataggcagccaacttagaaaacgtctgtttacccatatccagggattatcc
attagcttttttgatgaaaacaatacgggagaactgatgtctagggtaaaggatgatgtt
gacaggatttgggccgctaccggttatgtaagtatgctaatttttgaggttactatccat
acgggaattgcattattctttatgtatagggaaagtgccagcttagcaattattccaact
attgtgctacctatcgtaggtggccttgccattttaatggagaataagttggggaaaata
tatgaaaatatcagtgaacaaaatgcaaagcttaatactgtagcacaggaaaacttagcc
ggtgtccgtactgtaaaagcctttgctagagaaaaatttgaaattaataaatttttatcc
cacaataaacaatactatgatttaaatatgaagcaatccaaggtgtttattaaactatat
ccttattttcagctgattacaaagcttcttcccatgtttgtaattttatttggaggaaga
caagtaattaggggtgaaatatctcttggtactttgggggcctttacagagtattctatg
aacattgtatggcccatggaaatgctaggctggctgtccaacgacttagctgcagcattt
gcttcatacaaaaggatacgaaaaatttttgcagaggaagctaaaattaccgaacctgaa
aatccggttatccttgatgaggtaaaaggtagtgtcgagtttaatcaagtatcctttaat
ttaaacggtaatgatattttaactgatatcagttttaaactagaagcaggaaaaaccata
ggaataatgggtactacaggagccggaaaaagttcaattataaacttactgcaaagattt
tatgatgctagtcaaggtgaaattcttctagacggtgttaatattaaagacttatcctta
aaacagttaagaggaagtatatccttagtaatgcaggatgtatttttattctctgatacc
attaatgaaaatgttaaattaggtaaaaggccttgggttaagcaggaagaggtaattgaa
gctgcccattactctcaagccagcgaatttatagaacggatggatgatggttatgatacc
ataatcggagaaagaggtgtgggcctatcagggggacaaaagcagagaataagtatagcc
agagccttagctaaaaagacccctatcttggtactagatgattctacttctgcccttgat
atggaaactgaacatctaattcaaaaatccctaaccgacattaaggctacaaagataatt
atagcccacagaatatcggctgtaagaaatgcagatgaaattattattctggaaaacggt
aaaatcaaggaaaggggcacccatgaaaccctccttaaagaaaagggatactattatcaa
acttatcaggcccagtacggtgattatatatccgactccggtaatagggaggtgactaca
tgtctataa
DBGET
integrated database retrieval system
