Herbinix luporum: SD1D_0184
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Entry
SD1D_0184 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsd03032
]
SD1D_0184
03036 Chromosome and associated proteins [BR:
hsd03036
]
SD1D_0184
03400 DNA repair and recombination proteins [BR:
hsd03400
]
SD1D_0184
DNA replication proteins [BR:
hsd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SD1D_0184
Chromosome and associated proteins [BR:
hsd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SD1D_0184
DNA repair and recombination proteins [BR:
hsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SD1D_0184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CUH91738
UniProt:
A0A0K8J356
LinkDB
All DBs
Position
I:186997..187272
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AA seq
91 aa
AA seq
DB search
MNKAELVAAIAERTEFSKKDSEKALKAFIDVVSEELAKGGKVQLVGFGTFEVVDRPARTG
RNPLTNEPMMIAASKAPKFKAGKALKDIVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagaattagtagcagctatcgcagaaagaacagagttttctaagaaggat
tcagaaaaggctttaaaggcttttattgatgttgtttcagaggaacttgcaaaaggtggt
aaagttcaattagttggttttggtacattcgaagttgttgacagacctgcaagaacagga
agaaatcctttaaccaatgagcctatgatgattgctgcttctaaggcacctaagttcaaa
gctggtaaagctttaaaagacattgttaacgcatag
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