Herbinix luporum: SD1D_0210
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Entry
SD1D_0210 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsd03019
]
SD1D_0210
Messenger RNA biogenesis [BR:
hsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD1D_0210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
CUH91763
UniProt:
A0A0K8J376
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All DBs
Position
I:212576..213529
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AA seq
317 aa
AA seq
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MKYIRDLREGDIIKNEIYLCKSKQVLRGKSGKEYVSLILQDKTGTIDGKIWDFNCEIGQY
EAMDFVHIDARVTSFQDALQLNISKIYKSREGEYYPEDYFPKTNKDVEEMYKQIKDYIFS
IKESNLRSLIESFFINDKDFIKKFKEHSAAKSVHHSFMGGLLEHTLSVVNMCNFYAQNYQ
IINRDLLISAALLHDIGKMDELSAFPRNDYTDEGQLLGHIFIGSNKVQERIKEIKNFPNK
LASELIHCILAHHGELEYGSPKKPATIEAMALHFADNTDAKLQTMTELLNSCDDKVEWMG
YQRMFESNIMRSTKGIE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatatccgcgatttaagagaaggggacataataaagaatgaaatttatctgtgt
aaatccaaacaggttctaagaggaaagagcgggaaagaatatgtatctttgattttacaa
gataaaacaggaacaattgacggtaagatatgggattttaactgtgaaatagggcaatat
gaagcaatggatttcgtacatatagatgcgagggttactagcttccaagatgcactacag
ttaaatatcagtaaaatatataaaagcagagaaggggagtattatccggaggactatttc
ccaaagaccaataaagatgttgaggaaatgtataaacagattaaggattacattttctca
attaaggagtctaatctaagatcccttattgaaagcttttttataaatgataaagatttt
attaaaaagtttaaggagcactctgcagctaaaagcgtacatcatagctttatgggaggc
ttattagaacataccttaagcgttgttaatatgtgtaatttttatgcgcaaaattatcaa
ataataaatagggacttattaatatcagctgcactgcttcatgatattggtaagatggat
gaactgtctgcatttcccagaaatgattatacagatgaaggccagcttctaggacatatt
tttattggttcaaataaagttcaagaaagaataaaagaaataaaaaatttccctaacaag
cttgccagtgaattaattcactgtatcttggctcatcacggagagttagaatacggttca
cctaagaagccggcaaccattgaagctatggccttgcattttgctgacaatacagatgct
aagctgcaaactatgactgaactgctaaactcttgtgatgacaaggtagagtggatgggt
tatcagagaatgtttgaatcaaatattatgagaagtacaaaaggtatagagtaa
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