Herbinix luporum: SD1D_0371
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Entry
SD1D_0371 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02407
flagellar hook-associated protein 2
Organism
hsd
Herbinix luporum
Pathway
hsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SD1D_0371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hsd02035
]
SD1D_0371
Bacterial motility proteins [BR:
hsd02035
]
Flagellar system
Flagellar assembly proteins
Filament
SD1D_0371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FliD_C
FliD_N
Ribosomal_L18p
Motif
Other DBs
NCBI-ProteinID:
CUH91924
UniProt:
A0A0K8J3G4
LinkDB
All DBs
Position
I:371945..373903
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AA seq
652 aa
AA seq
DB search
MPPLRLSGLASGMDTEAVIEQLMKAERLKTTKVQNKITTTEWKQDKWKDLNKKIYSFYTN
QLSKLRMQGNFDIKKATSSNTSKVEVTAANTAPEGTHIIKVKQLASSQFLTGAKIDKDIN
LNTKLSELGLKAEDGVTIHINAEKSVDFEVNSNSTVGDFINALRSAGLNANYDTVQKRFF
ISSKKSGVENQFTMYTSSETLKDKNAVLDFIGYGSLSSQDKNKVNDYLASYLKSEDSNEK
NEILENLTKIKFNSEAFINEYMADEENKAAATAAVQERLKDEYPDGVIPQEQLEEEVQKE
LENAAKTAAQERFDSLKNELEPLMEKYADQSENPASESVSLSGLGLGEIRNDSGTIELSG
VTGAVLVNAKDAIIEYNGAELTGSSNNFSVNGLNLNLKGITAVGDADKGIEDDVISISIT
NDTQAVYDMVKDFVKSYNELLTEMNEAYYAASARGYDPLTDEEKETMTEEQIKKWEDKIK
DALLRRDDTLGSLLSMFRTSLSEGVKVGDKTYSLASFGIMSGDYSEKGILHIHGDEDFAK
VASNDNKLMEALSNNPEEVRTVLNTIADKLYSSLMNKMKSTTLSSALTVYNDKELSKTLD
NHKSDLKKLEAKLAKIEEKYYKQFAAMESAMAKMNAQSSSLMSMLGINTGQN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacttagattatcgggattggcctccggaatggatacagaagctgtaattgag
cagctgatgaaggcggaaaggcttaagacaacaaaagtacaaaataaaataacaaccaca
gaatggaaacaggataagtggaaagatcttaataaaaagatttactccttttatacaaat
caattatcaaagttgcgtatgcagggtaattttgatataaaaaaggcaacatcttcaaat
acaagtaaggtggaagtaacagcggcaaatactgcccctgaaggaacccatattattaag
gttaagcaactggccagctctcagtttctaaccggtgcaaaaattgataaggatattaat
ttaaataccaaattgtcagaactgggattaaaggcagaagacggagttacaatacatata
aatgcagaaaaatcagttgattttgaagttaattcaaattcaaccgtaggagatttcata
aatgccttaagaagtgcaggcttaaatgccaattatgatacggttcagaaaagatttttt
atcagctccaaaaaaagtggagtagagaatcagtttaccatgtatacttcttctgaaact
ttaaaagataagaatgctgtattagactttattggatatggttctttaagcagccaggat
aagaataaggtaaatgattacttggcatcttatttaaaaagtgaagattctaatgaaaag
aatgagatattagagaatctaactaagataaagtttaacagtgaagcatttattaatgaa
tatatggcagatgaagaaaacaaggcagcagcaaccgctgctgtacaagaaagacttaag
gatgagtatcctgacggagtgataccccaggagcagctagaggaagaagtgcaaaaagaa
ttagagaatgctgctaagacagcagctcaggagcgctttgacagcttaaagaatgaactt
gagcctcttatggagaaatatgcagatcagagtgagaatcccgcttccgaatcagtaagt
ttaagtggactgggcttaggagaaataagaaatgatagcggaaccatagagctttctgga
gttaccggtgctgttttggtaaatgctaaagatgctattatagaatataacggagctgaa
cttaccggatcatctaataatttctccgtcaatggacttaatcttaaccttaaagggatt
acggcagtaggagatgcagataaaggtatagaggatgatgttataagtatatccattacc
aatgacacacaagccgtatatgatatggtgaaggattttgtaaaatcatataatgaactg
cttacagaaatgaatgaagcatattatgctgcttcagcccgtggttatgatcctctgact
gatgaggaaaaagagaccatgacagaggaacagattaagaaatgggaagataagataaag
gatgctctacttagaagagatgatacactgggaagtctactaagtatgtttcgtacaagc
ttaagtgagggagtaaaggtaggagataagacatattccttagcaagttttggtataatg
tcgggggactattctgagaaaggaatattacatattcatggtgatgaggattttgctaaa
gtagcatccaatgataataaacttatggaggctctgagtaataatccagaagaagtaaga
acagtgttaaataccatagcagataaactttattcttccttgatgaacaagatgaagagt
acaaccctaagcagtgctttaactgtgtataacgataaggaattgtcaaagacactagat
aaccataaatccgatttaaagaaattggaggccaagctggcaaagattgaagaaaagtat
tataagcaatttgcggcaatggaatctgccatggcaaagatgaacgcacaaagttcaagc
ttgatgtcaatgcttggaataaacacaggtcaaaattag
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