Herbinix luporum: SD1D_0438
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Entry
SD1D_0438 CDS
T04072
Name
(GenBank) putative secreted protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd01501
beta-Lactam resistance
hsd02010
ABC transporters
hsd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0438
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD1D_0438
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD1D_0438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0438
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SD1D_0438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
CUH91990
UniProt:
A0A0K8J3C6
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Position
I:447698..449350
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AA seq
550 aa
AA seq
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MKYMKLKKIIAVILLLTSTMAILSSCGKKNTNTTDNKKSPYPGTSEDKSITVNITSEPPE
MFSVTTTDATSFIVLRHILENLVTLDENDKVIPGVAKEWTVSEDELEYTFYLRDDMKWSN
GEPVTAHDFVFAWTSLLTPSFAADYAYFGYVFKNGKAYNEGKVGADQLGFKAISDYELQV
TLENPTPYFLDTLAFGVFAPLNEKAYNEFGSAYGTDADKMVYNGPFIMTSWEHESRIVLE
KNPDYYDKDKIELEKINMLMINDSNAALNSFKVGELDIVGLTGDQVQLMKNENYPIHSYS
DGSTFYLEYNLQNPYLANQNLRKAITYAIDKQAFIDSIVKNDSKVATSFTSPAIHGLNDN
FYMEVGKLATEFDLELAKDHYNKALEELNVDKITLSLIIDDNDTAVKNGAFIQEQLRANL
GLEINIEPMPFKSRLSRMSNKDFDIVFAGWGPDYNDPLTFLDIFETGNGNNHGSYSNTEY
DELLDKVRVELDAKKRFEYLTELEKIVMDDLPVGPIYWRVKDYVLSGKIESGVIRTAFQD
LNLKYVKLAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatgaaattaaaaaaaataatagctgtcattttattattgacttcgacaatg
gctatattatcatcctgtggtaagaaaaatacaaacaccactgataataaaaagagccct
tatccaggtacttctgaggataaatcaataacggtaaatattacttcagaaccaccggag
atgttttcagttaccacaactgatgcaacttcctttattgtactgcgccatatccttgag
aatcttgtaacattggacgaaaatgataaggttattcccggtgttgctaaggaatggact
gtaagtgaggatgaactagaatataccttttacttaagggatgatatgaaatggtccaat
ggtgaaccggttacagcccatgactttgtatttgcatggacctcactgcttacacctagt
tttgcggctgattatgcttattttggttatgtatttaaaaacggaaaagcttataatgaa
ggcaaagtaggggcggatcagttgggatttaaggcaatttcagattatgagcttcaagtg
acattagaaaatcctactccatattttcttgatacattagcctttggagtatttgctccc
cttaatgaaaaggcctataatgagtttggctctgcctatggtacagatgcagataaaatg
gtatacaacggtccctttataatgacttcctgggagcatgaaagtagaattgttcttgaa
aagaatcctgattattatgacaaggataaaatagagctagagaaaataaatatgcttatg
attaatgattctaatgcggccctaaattcctttaaggttggtgaattagatatagttggt
ttaaccggagatcaggtacaattaatgaaaaatgaaaattatccgattcacagttattca
gacggttcaactttctatttggaatataacttgcaaaatccttatctggcaaaccaaaat
ctaagaaaagctataacatatgctattgataaacaggcctttatagatagtatagtaaaa
aatgattcaaaggtggcaacatcctttacctcaccggctattcatgggctaaatgataac
ttctatatggaagttggtaagttggcaactgaatttgatttagaactggctaaagatcat
tataataaggccttagaagaactaaatgttgataaaattaccctatcattaataattgat
gataatgatactgcagttaaaaatggagcatttattcaggaacaacttagggctaatctg
ggcctagaaattaatatagagcctatgccttttaagagtaggcttagcaggatgtcaaat
aaagattttgatatagtatttgcaggctgggggcctgactataatgatccacttacattc
ttagatatctttgaaacaggaaatggcaataatcatggcagctatagtaatactgaatat
gatgaattattagataaggtacgtgtagaattagatgctaaaaaacgctttgaatattta
acagagcttgagaaaattgttatggatgatctgcctgtaggcccaatatactggagagta
aaagactatgtgctaagtggtaagattgaatcgggagttattagaactgctttccaagat
ttgaacctaaaatatgtaaagctggctaaataa
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