Herbinix luporum: SD1D_0441
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Entry
SD1D_0441 CDS
T04072
Symbol
oppD
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd01501
beta-Lactam resistance
hsd02010
ABC transporters
hsd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0441 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD1D_0441 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD1D_0441 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0441 (oppD)
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SD1D_0441 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ABC_ATPase
DUF87
nSTAND3
FtsK_SpoIIIE
AAA_16
NB-ARC
AAA_29
NACHT
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
CUH91993
UniProt:
A0A0K8J3T6
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All DBs
Position
I:451415..452434
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AA seq
339 aa
AA seq
DB search
MNKVLEVNDLHVSFDTYAGEVKAVRGVSFDLNEGEILAIVGESGSGKSVTAQTIMKLNPM
PPTRIVSGEILLGDIDIVKASEREMMAIRGNEVSMIFQDPMTCLNPTMQVGKQLTEAIRH
HKKLSKDEAYREAIRLLNIVRIPNSKQRVLQYPHEFSGGMRQRVMIAMALSCEPKLLIAD
EPTTALDVTIQAQIMELLMEIRENTNTSIIIITHDLGVVASIADRVAVMYGGKIVESGSS
EDIFYHPSHPYTKALLESLPKTDMDKNKRLASIAGTPPDLLNPPAGCPFAGRCKYTMKIC
IPHMPPDFEPGKKHKAACWLLHKDCPDPEPASAIGGGEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagttcttgaagttaatgatttgcatgtatcttttgatacttatgccggagaa
gtaaaagcagttaggggagtaagttttgatttaaatgagggagaaatcttggctatagtt
ggggaaagcggcagcggaaaaagtgtaactgcacagactattatgaaactaaatcccatg
cctcccacccgtatcgtaagtggtgaaattttacttggagatatagatattgtaaaagct
tccgaaagggaaatgatggccataagaggaaatgaggtaagtatgatttttcaagatccc
atgacctgcttaaatcctactatgcaggtggggaagcaattaacagaggctatcaggcat
cataaaaagctgtcaaaggatgaggcttatagggaggcaatacggcttttgaatatagtt
agaattccgaattcaaagcagagggtcttgcagtatccccatgaattttcaggaggaatg
aggcaaagagtcatgatagctatggccctttcttgtgaaccaaagcttttaattgccgat
gagcctacaactgccctggatgttacaattcaggctcagataatggagcttctaatggaa
ataagggaaaatactaatacatccattataataattacccatgacctaggagttgtagcc
agtattgccgaccgggtggcagttatgtatggaggtaaaattgtagagtccggcagcagt
gaagatattttctatcatccttcccatccatatacaaaggccttacttgaaagtctccca
aagactgacatggataaaaataagcggctggcatccatagccggaactcctccggattta
ctaaatccgccagcaggttgcccttttgccggcagatgtaaatatactatgaagatttgc
ataccccatatgcccccggattttgaaccgggaaaaaaacataaagcggcctgttggctc
cttcataaggattgtcctgatccggaaccggcttctgccatagggggaggtgaaaaatga
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