Herbinix luporum: SD1D_0442
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Entry
SD1D_0442 CDS
T04072
Symbol
ykfD
Name
(GenBank) putative oligopeptide transport ATP-binding protein YkfD
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd01501
beta-Lactam resistance
hsd02010
ABC transporters
hsd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0442 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD1D_0442 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD1D_0442 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0442 (ykfD)
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SD1D_0442 (ykfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
RsgA_GTPase
AAA_13
AAA_29
AAA_16
NB-ARC
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CUH91994
UniProt:
A0A0K8J3Q8
LinkDB
All DBs
Position
I:452431..453423
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AA seq
330 aa
AA seq
DB search
MMSKNSQILVEIKDVSKFFKVSSGILKAVNHVNLEIKKGETVGLVGESGCGKSTLGKVIM
GIYSPTTGQVIYHGKKELLVKKENLFEYAKLAQIIFQDPYSSLDPRMTVGSIIEEGMIIH
NMYNKKVRKERVYELLDLVGLNREHANRYPHEFSGGQRQRIGIARALAIEPEFIVCDEPI
SALDVSIQSQIINLLKDLQEKLGLTYLFIAHDLNIVKYISDRIAVMYLGNIVELSDSDEL
YEKPLHPYTRALLSAVPIPDPKKERAKERQLLEGDVPSPINPKHCCPFVSRCPHATDICS
RDFPELEMKKGHLVACHHADEPIYNREIIK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaaaacagtcagattttagttgaaataaaggatgtatctaagttttttaag
gtctctagcggaatattaaaagcagtaaatcatgttaatcttgaaataaaaaaaggtgaa
acagtaggacttgtgggagaatccggttgtggtaaatctacacttggtaaagttataatg
ggaatatattcacctactacggggcaggtaatttatcatggaaaaaaagaattacttgtt
aaaaaggaaaatctatttgaatatgccaagttagcacagattatatttcaagacccctat
tcttccttagatccaaggatgacagttggttccattatagaagaaggtatgattatccac
aatatgtataacaaaaaagttcggaaggaaagagtttatgaacttttagatcttgtaggt
ttaaatagagaacacgctaatcgctatccccatgaattttccggaggtcaacggcaacgt
ataggaattgccagggcacttgctatagaacctgaatttattgtatgcgatgaaccaatt
tcagccctggatgtatctatacagtcacagattataaatttattgaaagatttgcaagaa
aaattagggcttacctatctttttatagcccatgacttaaatattgtgaaatatatcagt
gacagaattgcagttatgtatctgggtaatattgtggaattatcagatagtgatgagctt
tatgaaaaaccattacatccatataccagggccttactttctgcggtacctataccggac
cccaaaaaagaaagggcaaaggagaggcaactactagagggtgatgtaccaagtcccata
aatcctaagcattgttgtccttttgtcagccgctgtccccatgcaacggatatctgcagt
agggattttcctgagctggaaatgaaaaaaggacatttagtggcctgccatcatgcagat
gagccaatatataacagagaaataataaaataa
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