Herbinix luporum: SD1D_0462
Help
Entry
SD1D_0462 CDS
T04072
Symbol
DCTD
Name
(GenBank) Deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
hsd
Herbinix luporum
Pathway
hsd00240
Pyrimidine metabolism
hsd01100
Metabolic pathways
hsd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SD1D_0462 (DCTD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsd02044
]
SD1D_0462 (DCTD)
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SD1D_0462 (DCTD)
Secretion system [BR:
hsd02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SD1D_0462 (DCTD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
APOBEC4_like
Bd3614-deam
SNAD4
APOBEC3
APOBEC_N
Motif
Other DBs
NCBI-ProteinID:
CUH92014
UniProt:
A0A0K8J3S5
LinkDB
All DBs
Position
I:complement(477163..477642)
Genome browser
AA seq
159 aa
AA seq
DB search
MKREDYINWDAYFMGIALLSAERSKDPNTRVGACIVSEDNKILSVGYNGMPMGCSDDEFP
WSREGNPLDTKYPYVCHAELNAILNFAGNDMKGAKIYITLFPCNECAKALIQKGIKEIIY
MSDKYAETDIVIASKRMLDAAGVNYRQYNSINKEIILSL
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagaagattatatcaattgggatgcatattttatgggtattgccctactttca
gctgaacgaagcaaagaccccaatacaagagtgggagcctgtatagtcagtgaggataat
aaaattctatcggtaggctataacggcatgcccatgggttgttctgacgatgaatttccc
tggagtagggaaggtaatcctttggatacaaaatatccatatgtatgccatgcagaatta
aatgctattttaaactttgcaggaaatgatatgaagggggcaaagatttatatcaccctg
tttccctgtaatgagtgtgcaaaggccttaattcaaaaaggtattaaggaaattatctat
atgagtgacaaatatgccgaaacagatatagttattgcctcaaagcggatgctagatgcg
gcaggggttaactatagacaatacaattccattaacaaagaaataatcctatcattataa
DBGET
integrated database retrieval system
