Herbinix luporum: SD1D_0580
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Entry
SD1D_0580 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K08693
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:
3.1.4.16
3.1.3.6
3.1.3.5
]
Organism
hsd
Herbinix luporum
Pathway
hsd00230
Purine metabolism
hsd00240
Pyrimidine metabolism
hsd00760
Nicotinate and nicotinamide metabolism
hsd01100
Metabolic pathways
hsd01110
Biosynthesis of secondary metabolites
hsd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SD1D_0580
00240 Pyrimidine metabolism
SD1D_0580
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SD1D_0580
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
SD1D_0580
3.1.3.6 3'-nucleotidase
SD1D_0580
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SD1D_0580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_6
5_nucleotid_C
Metallophos
PGA_cap
ETF
Big_13
TPR_ESP1_2nd
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CUH92131
UniProt:
A0A0K8J3C3
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All DBs
Position
I:609891..613916
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AA seq
1341 aa
AA seq
DB search
MAKRKTGFHIIRIITTIISLSVFIGFASNQLGSVSASKNEKDTVDIRIIGTTDLHGQLNS
FDYEQGVDYNNGGLARVFDLIKKTKAELPEENVVTLDAGDVLYDYTTEYIFSTNQEAIQP
IYKAMKLIGYDAITLGNHEFDYGYDYILRQLDGSGLRDITVVSNVTDARTGEHPFIENML
ITRKVKTKSGKEVEVKIGITGQAIPHFTGKTHSYAGILIGEDMVENAKKQAAKLKEMGAD
IIIALAHTGIGPQNPEPKFKNVAYALTKIPEIDVVVCGHEHNLFPTKDMTSPYYKLPNVD
RNTYLMNGKNVIMAGDRGKAIGVVDLVLEVKGDNINIIDRKSELRMVTANNTDEDKKIAA
MFGEWEDLLKEYSSDILGELEEGTLIQNYFGLLADSAAIQLLNDSKIHYALSKIKANEKK
YIDYPIIAASTYESFGVKAIEDFVNISDKITESDLAALQNYNSYLYVYTITGAQLKEWLE
WSASAYETINLDTKWKDSTMSSLMKETGLKSLIREEWLDDWSNFYIFDGISYEIDPSKKP
RYDFSGNLVSSSRRVSKVYYQGKEVTDDMELLIATNKITKPTQANKGVEEQVVLKGFVRS
QSVLSKYIKQLVVSGSIMPQVDYNWKLKLPKNYKFIIKVPYYADTLFEETPWYEEYLLQE
NKYKYYTASYPAEEEDVTPPHLVVAPLITNPTASPFEIAVQAVDDAEIKYLRFTNGEIAA
DSNIWVVAKDIPSKGFTVWKNGVYSICAEDIHGNKQVKHIVIDNFNDKLLPRPTVNNYTN
RKSKISGKAEPNTTLVIETPNKVYEEKIGRSGNFSVPLPGQLAETYITLYVKDEERELES
ERVEVRINRTGPNQPLVSPIYNNMNYITGDARDDITSVVVIVDDIAYVSNKGGKELFEAN
TEIYNSSLDIVETLVDISPDGQFFIMLPPQKAGQTIKVYAIDHISRNSRVTTTTVIEAGP
NAPVAYEVSNIERTISGYVPSSKNQIYNIELNLGDKVYKTKTDKKGNFTFTFNDQLYAGQ
SLVLVATDEKNGKERQSIPVEIKVKDIESYVRPNSTNLIINRITDKSHVISGYYYAGGSV
YVAITEGKGKNFKNSIYSVPTDYNSEFMMELDEKLEVGTKVYAMVRFVDGKILQAQSFTV
VAGRPDTPSLLNQITNTDKVVKVVAAKDCKITLTIGKKTYTTKKYQYDKATDQYIYTLKT
DRDLSGTKVTVTASNESGTSDPLVSKLVKVAPDSPKVNPILAGDKVITGTIELLDYVDPQ
KDNSKKEEKLPKEFKNAPSKVAKTQTRVYAQIGKKTYEGTIDNKGKFVIEIPKQKKGTAI
KIWGTNKAGRGPLVKVLVTKK
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagaaaaacaggattccatattataaggattattacaacaattatttcttta
agtgtatttataggatttgctagtaatcaacttggcagtgtaagtgctagtaaaaatgaa
aaagacacagttgatattagaattatcggaaccacagacttacatggacagcttaacagt
tttgattacgaacaaggtgtggattataataacggtggtctagccagagtatttgatctg
attaaaaagaccaaagcagagcttccagaggaaaatgttgttaccttggatgccggagat
gtattatatgactataccacagagtatattttttctaccaatcaggaagcaattcaacct
atctataaggcaatgaaacttataggctatgatgcaattactttaggtaatcatgagttt
gactatggctatgattatattctgcgtcaattggacggatctggccttcgtgatattacg
gtagtatcaaatgtaactgatgcaagaaccggggagcatcctttcattgagaatatgctg
attacccgtaaagttaaaaccaagtcaggcaaagaggttgaagttaaaattggaattaca
ggtcaggctattccccattttaccggtaaaacccatagctatgccggtatattaataggg
gaagatatggtggaaaacgctaagaagcaggcagctaagttaaaggaaatgggggctgat
ataattatagccctggcccatacaggaatcggaccccaaaatcccgaacctaaatttaaa
aatgtagcctacgctttaactaaaatacctgaaatagatgttgttgtatgtggacacgaa
cataatctattccctactaaggatatgacctctccttactataagcttcccaatgttgat
agaaacacctatcttatgaacggcaaaaatgtaataatggccggtgaccggggtaaagcc
attggcgttgttgatttggtattggaggtaaaaggggataatataaatattatcgaccga
aagtcagaacttaggatggtaaccgctaacaataccgatgaagataagaagattgcggct
atgtttggggagtgggaagatttactaaaggaatattcctcagacatactgggtgaatta
gaagaaggtactctaattcagaattattttggtttattagctgatagtgcagcaattcaa
ttattaaatgattctaagattcattatgccttaagtaaaattaaagctaatgaaaagaaa
tatattgattatcccattattgctgcttctacctacgaaagttttggagttaaagctatt
gaagattttgtcaatatatctgataagattacagagtcagatttagctgccttgcaaaac
tacaatagttacctttatgtatataccataaccggtgcccaattaaaagaatggttagaa
tggtctgccagtgcttatgaaaccataaaccttgatacaaaatggaaagacagtaccatg
tcctcattaatgaaagaaacaggtttaaaatctttaattcgtgaggaatggttggatgat
tggagtaacttctatatatttgatggtatcagttatgaaattgacccatcaaaaaagccc
agatatgatttttcaggaaatttagtcagcagtagtagaagagtttccaaggtttattat
caaggaaaagaagttactgatgatatggagctgttaattgccaccaataagattactaag
cctacccaagccaataaaggagtagaagaacaggtggtacttaagggctttgtaaggagc
cagtcagttctaagtaaatatattaagcagctggtggtaagtggaagtattatgccccag
gtagattataactggaaactaaagttacccaagaattacaaatttattataaaggtccct
tactatgccgatactttatttgaagaaactccatggtatgaggagtatttgcttcaggaa
aataagtataaatattatacagcttcctatcctgcagaagaagaggatgtgactccaccc
catttggtagtggcaccacttattacaaatcctactgccagtccttttgagatagctgtt
caggcagtggatgatgccgagattaagtatcttagatttacaaacggtgaaattgctgca
gatagtaatatatgggtagttgccaaggatatacccagtaaaggatttactgtatggaag
aatggtgtatattcaatatgtgctgaggatatccatggaaataaacaggttaaacatata
gttattgataattttaatgataagcttttaccaagacctactgtaaataattatactaac
agaaaatctaaaatcagcggaaaagctgaaccaaatacaaccctggtaattgaaactcct
aataaagtttatgaggaaaagataggccgtagcggtaatttctcagttcctcttccggga
caactggcagaaacatatattaccctatatgttaaagatgaggaaagagaattagaaagt
gagcgggtagaggtaaggattaaccgtaccggtcctaatcagcctctggtaagtcccata
tataataatatgaattatattaccggagatgccagagatgatataacttctgtagtagtt
attgttgacgatattgcttacgtttctaataaagggggcaaggagttatttgaagccaat
acagaaatatataattcctccctggatattgtagaaaccttggtagatatatcccctgac
ggtcaatttttcataatgctgccaccccaaaaggcaggacaaaccataaaggtttatgcc
atagaccacatatcaagaaacagtagggtaactactactaccgtaattgaagccggtccc
aatgcaccggtggcttatgaggtaagtaatattgaaagaacaatttccggatatgttcct
tcctcaaaaaatcagatttataatattgagttaaacttaggggataaggtatataaaacc
aagacagataaaaaaggtaactttacatttacttttaatgatcagctatatgcaggtcag
tccctagtccttgtagcaactgatgaaaagaacggtaaggaaagacaaagtattcctgta
gaaattaaagtaaaagatattgaatcctatgtaaggccaaattcaacaaatctgattatt
aaccgcataacagacaaatcccatgtaatttccggatattattatgccggtggaagtgta
tatgtggccattactgaaggtaaaggtaagaactttaaaaatagtatatatagtgttcct
accgattataacagtgaatttatgatggagcttgatgaaaaactagaggtgggaaccaag
gtatatgccatggtaagatttgttgacggaaagattcttcaagcccagtcatttacagta
gtggcaggaaggccagatacacccagcctacttaatcaaataactaatacagataaagta
gttaaagtagtggctgccaaggattgcaagataacccttacaataggtaagaaaacatat
actaccaaaaaatatcagtatgataaagctacagatcaatacatttataccttaaaaaca
gacagagatttatccggtactaaagtaaccgtaaccgcttctaatgaatcagggaccagt
gaccccttagtttcaaagcttgtaaaggttgcaccggattcacctaaagtcaatccaatt
ttggcaggtgataaagtaattaccggaaccattgagcttctagattatgtagaccctcaa
aaagacaactcaaaaaaggaggagaaacttcctaaagaatttaagaatgctccttctaag
gttgcaaaaacccaaacaagggtatatgcccaaatagggaaaaaaacatatgagggaacc
atcgacaataagggtaagtttgtaatcgaaattccaaagcagaagaaaggtactgccatt
aaaatttggggtactaataaggccggaagaggtcccttagttaaggtgcttgtaactaag
aaataa
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