Herbinix luporum: SD1D_0605
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Entry
SD1D_0605 CDS
T04072
Name
(GenBank) putative secreted protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0605
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
SD1D_0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
DUF5517
Motif
Other DBs
NCBI-ProteinID:
CUH92156
UniProt:
A0A0K8J3H4
LinkDB
All DBs
Position
I:645158..646768
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AA seq
536 aa
AA seq
DB search
MVKKISIMILTILILCMFIACQSKEDDIPNQVDEGTPAWQRLAQEPITFDWYINYSWYTT
PWGQNAVSKAITAETGVSIKFIVPTGNESQKLDAMIASDILPDFITLGWWEEQAQTMINK
DMVYALNILADQYDPYFYQVTNEQVINWYTKEDGNIYAYPNSAYTPEDFKSGINIGSNQN
FLVRKDIYEAIGSPDMTTIEGFKNAVIEAHKMFPYVNGEPLIPIGSDEFYDEGCNSFDKY
LQNFLAVPFEIDGKYNHRYIDEDYLNWLKMFRELNEMGYLSKEIFVDKRVQLEEKLAKGR
YFCLLYQGSDIQASQKILNAKNPESIYIAVDGPKNSKGDDPTLPSAGINGWTLTFISKNC
KDPERAIAFLSYLISEEGQKKVFLGVEGVTYDYVDGKYVIKPHVLELLNTNRYEYDRLYG
ADDAYWMLQNNVMQDQWLEIRDPLTHSLWEWTKPYTVYTSQYDIVFEADSSFAQIDKKIK
LEWGKTLPLLLLAKSEEEFDEIFKNYKDKIYALGFEQLMEEYTRLMQDSKRKLGLE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaaatatctataatgattcttaccatcctgatactctgtatgtttatagcc
tgtcagtcaaaagaggatgatattccaaatcaggtggatgaagggacacctgcatggcaa
aggctggctcaggaaccgattacatttgactggtatattaattattcttggtatactacg
ccttggggacagaatgctgtctccaaggctattactgctgaaacgggggttagcatcaaa
tttattgtaccgacaggaaatgaatctcagaaacttgatgccatgattgcctcagatatt
ttgccggattttattaccttaggctggtgggaggaacaggcacagaccatgattaataag
gatatggtatatgccttgaatatccttgcagatcaatatgatccatacttttatcaggta
accaatgagcaggtgattaactggtatacgaaggaggatggaaatatatacgcatatccc
aattctgcctatacgccagaggattttaaatcaggtattaatataggaagcaaccagaat
tttttagtacgtaaagatatctatgaagccattggaagtcctgatatgaccaccatagaa
ggatttaaaaatgcggtaatagaagcccataaaatgtttccctatgtaaacggagaacca
ttaatacccattggttctgatgaattttatgatgaaggatgtaattcttttgataaatat
ctgcaaaatttcttggctgtaccctttgaaatagatggaaaatacaaccatagatatata
gatgaggactatttgaattggttaaagatgtttagagagttaaatgaaatgggatattta
tcgaaagaaatatttgttgacaaacgtgtacaactggaagaaaagttggcaaagggaaga
tatttttgtcttctctatcaaggaagtgacatacaggcctctcaaaaaattttaaatgct
aagaatccggaaagcatttatattgctgtagatggacctaaaaattctaaaggtgatgac
ccgacattacctagtgccggtataaatggctggacccttacctttatctcaaagaattgc
aaagatccggaaagagccattgcctttttaagttacttaattagtgaagagggacaaaaa
aaagtctttcttggagttgaaggggttacctatgattatgtggatggcaagtacgtgatt
aagccccatgtactagaacttttaaatactaatcgatatgaatatgacagattatatggt
gccgatgatgcctattggatgctgcaaaataatgtgatgcaggatcaatggttggagata
agggatcctcttacacattccttatgggaatggacaaaaccttatactgtatataccagc
cagtatgatattgtctttgaggcagatagtagctttgcacagattgacaagaagataaag
ctggagtggggaaagaccttgcccttattgcttcttgctaaatcagaggaagagtttgat
gaaatctttaaaaattataaggataaaatatatgctttgggctttgaacaactaatggaa
gaatacacaaggcttatgcaagattcaaaacgtaaattaggtttggaatag
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