Herbinix luporum: SD1D_0625
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Entry
SD1D_0625 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0625
01504 Antimicrobial resistance genes [BR:
hsd01504
]
SD1D_0625
Transporters [BR:
hsd02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
SD1D_0625
Antimicrobial resistance genes [BR:
hsd01504
]
Gene variants
Macrolide resistance genes
Transporters
SD1D_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
NACHT
AAA_29
Pox_A32
Dynamin_N
MobB
MMR_HSR1
TsaE
KAP_NTPase
AAA_14
nSTAND3
HEPN_AbiA_CTD
ATP-synt_ab
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CUH92176
UniProt:
A0A0K8J3I8
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All DBs
Position
I:670041..671603
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AA seq
520 aa
AA seq
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MSQILVNNLSFSYDTAYDMIFENVSFQIDTDWKLGFIGRNGKGKTTFLNLLMGKYEYRGS
IRAGVNFDYFPFEIEDIERNTLDLIKDIIAPFKEWEKEMEECLLSNIDRYGQLLELYQQH
DGYIIDELIQKELGKLKVDLDILTRPFNTLSFGERTKIMLAALFLKKNNFLLIDEPTNHL
DMEGREILADYLQSKKGFILVSHDRAFLDKCIDHVLSINRTNIEVEKGNYSSWYHNKRLR
DNYEIEKNKQLIKEISSLSEAARRAGSWSDKIEASKTGNHVFDRGYVGHQAAKMMKRAKA
IERRKLNTLEEKKDLLKNIEETEALKMNIIPFHKKRLIELEDLSLFYENKKIASNINLTV
KSGDRLAIRGKNGSGKTTLLKLLLGKDIKHRGRAYIASGLKISYVSQDTSWLEGSLKDFS
FKYGVDETIFKTILRQLDFERDQFDKDIRYFSQGQKKKVLLAKSLAEPAHIFFWDEPLNF
IDVFSRIQIEELLLAYKPTIAFIEHDKVFTKSVATKEIYL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaattttagttaataatctatcttttagttatgatacggcttatgatatgata
tttgaaaatgtcagctttcagattgataccgattggaagctaggatttataggacgaaat
ggtaagggtaaaactactttcttaaatcttttaatggggaaatatgaatataggggcagt
ataagagccggggttaattttgactattttccttttgaaatagaagatatagaaagaaat
acactggatcttataaaggatataattgcaccatttaaagaatgggagaaggagatggaa
gaatgcctgcttagtaatatcgacaggtatgggcagcttttggaattatatcaacagcat
gacggatatattatagatgaacttatccaaaaagaactgggaaaacttaaggtggattta
gatatactgacaaggccctttaataccttaagttttggagagcgtacaaaaattatgctt
gcagccttatttttaaagaagaataattttttgctaatagatgaacctaccaatcatctg
gatatggagggccgtgagatattggcagactatcttcagtcaaaaaagggatttattctt
gtatcccatgatagggcttttcttgataaatgtatagaccatgtcctttctattaacagg
accaatattgaagttgaaaagggtaattattcttcttggtatcacaataaaagattaagg
gataattatgaaattgagaaaaataagcagttgataaaagagatttcctccctatcagaa
gctgcaagaagggccggctcctggtctgataaaatagaagcatcaaaaacgggaaatcat
gttttcgatagaggttatgtgggacatcaagctgctaaaatgatgaaaagagcaaaagct
attgaaagaaggaagttaaatacccttgaggaaaagaaagatttgcttaaaaacattgaa
gagacagaagctcttaagatgaatattatacccttccataagaaaagactaatagagctt
gaagatttatccttgttttatgaaaataaaaaaattgcttcaaatattaacttaactgta
aaaagtggtgataggctagccataaggggtaagaatggttcaggaaagaccaccctacta
aagctgcttcttggtaaagatattaaacataggggtagggcctatattgcttccggccta
aaaatatcctatgtatcccaggatacttcttggctggaggggtccttaaaggatttttct
tttaaatatggagtggatgaaactatttttaaaacaatacttcgtcagttggattttgaa
agagatcaatttgataaggatatccggtattttagtcaaggacagaaaaagaaggtactt
ctggcaaaaagccttgcagaacctgcccatatatttttctgggatgaacctttgaatttt
atcgatgtatttagcagaatccaaatagaagagctgcttttagcctacaagcctacaatt
gcatttatagaacatgataaagtatttactaagagtgtggctaccaaagagatatattta
taa
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