Herbinix luporum: SD1D_0671
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Entry
SD1D_0671 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0671
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
SD1D_0671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
GRP
Motif
Other DBs
NCBI-ProteinID:
CUH92219
UniProt:
A0A0K8J4E1
LinkDB
All DBs
Position
I:722057..723367
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AA seq
436 aa
AA seq
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MKKSKKFIALFMMTIMLISSLAACGKKGKDEATDSQNNSEQTDNQGQNNQEDNKEETKVE
DVTLKVWGPQEEQDLLKQMTDAFAKAHPEYNITFEFGVVSEEEAATEITKDPAAAADVFA
FASDQTANLVSAGLLYPITLNIDAIKAANSEPSIQAATIDGQLYAYPFTPNSWFMYYDKS
KFTEDEVLSLEKMMEKDLGEGVKNFSVDINNGWYLSAFFFAGGCTLFGPDGKDPNTVTFN
DANGLAVTNYLIDLVSNPKFLEEDQGNILNAFANGTLGAACSGTWNAKAIEEALGENYGA
TKLPTININGEDRQLSNFADFKLIGVNSQTKHPIPAMELAEFLTNEENQKLRFEVRSIAP
TNLNLASDPVVLENPAVAALSLQTSFSTLQSSIPQMANYWVPAESFGNELISGKITKDNA
QEKLDVFVNSILSSLN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagcaaaaaatttatagcactatttatgatgactattatgcttatctcaagt
ctggcagcttgtggtaagaaaggtaaggacgaagctacagatagccaaaataacagtgag
cagaccgataatcagggacaaaataatcaggaggataataaagaagaaacaaaggttgag
gatgtaaccctaaaggtatggggaccacaggaagagcaggatttattgaaacaaatgact
gatgcatttgctaaggctcatccggaatataacatcacatttgaattcggtgttgtatca
gaagaggaagcagctacagagataacaaaggaccctgctgcggctgcagatgtatttgct
tttgcttcagaccaaactgctaatttagttagtgccggtctcttatatccaataacatta
aatattgatgccataaaagctgctaattcagagccttctattcaggcggcaacaatcgac
ggacagctatatgcttatccttttacaccaaattcctggtttatgtattatgataagagc
aaatttacagaagatgaagtactttcccttgagaaaatgatggaaaaggatcttggagaa
ggggtaaagaacttctctgtagatatcaataacggttggtatctgtcagcattcttcttt
gccggaggatgtaccttatttggtcccgatggaaaggatcctaatactgtaacatttaat
gatgcaaacggtcttgctgtaaccaattatctgattgatttggtatctaatcctaagttt
ttagaagaggatcaaggtaatattttaaatgcctttgctaacggtacacttggtgcagct
tgctcaggtacatggaatgcaaaagcaatagaggaagccctaggagaaaactatggtgca
actaaacttcctactatcaatattaatggggaagacagacagttaagcaactttgcagac
tttaagctaataggtgttaactcccagactaagcatcctattcctgcaatggagctggct
gagttcttaaccaatgaggaaaatcaaaaacttcgttttgaagtaagaagtattgctcct
accaacttgaatttggcatctgatcctgttgttcttgagaatcctgcggtagcagcactt
agcttacaaacatcattctcaacattacaatcatcaatacctcagatggcaaattattgg
gttccggctgaatcttttggtaatgagcttataagcggaaaaataacaaaggataatgct
caagaaaaacttgatgtctttgttaacagtattttgtcatcactaaattaa
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