KEGG   Herbinix luporum: SD1D_0750
Entry
SD1D_0750         CDS       T04072                                 
Symbol
hsdR
Name
(GenBank) Type I restriction enzyme EcoEI R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hsd  Herbinix luporum
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hsd02048]
    SD1D_0750 (hsdR)
Enzymes [BR:hsd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SD1D_0750 (hsdR)
Prokaryotic defense system [BR:hsd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SD1D_0750 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N T1RK_2nd HSDR_N_2 Helicase_C AAA_11 SLFN-g3_helicase AAA_34 nSTAND_NTPase5 AAA_22 Miga AAA_30
Other DBs
NCBI-ProteinID: CUH92298
UniProt: A0A0K8J4P6
LinkDB
Position
I:813228..815618
AA seq 796 aa
MIFVNKKDLSERDICSKYITPSLINAGWDLERQIREEVSFTDGRIIVRKKLVTRGERKRA
DYILYYKSNIPLAIIEAKDNKHPVGAGMQQALKYAEILDIPFVFSSNGDAFLEHDRTISV
GSKEREIPLNQFPSPEELWSRYKKAKGLSEREEEIVTQEYYFEQNGKSPRYYQRIAINRT
VEAIAKGQNRILLVMATGTGKTYTAFQIIYRLWKSRAKKRILFLADRNILVDQTMANDFK
YFGDKMTKITNRKIDKAHEIYLALYQGISGEDEFKNVYKQFSPEFFDLIIIDECHRGSAK
EDSAWREILEYFHPATQIGLTATPKETKDVSNIEYFGEPIYTYSLKQGIEDGFLAPYKVI
RVILDRDVEGYRPEKGKRDKYGFEIEDREYNIKDFDKNLVIENRTEIVAKKVSDYLKKNN
SRFAKTIFFCVDIEHAERMRQALVNENADLVAENPKYVMRITGDNEEGKAELDNFIDPAS
KYPVLVTTSKLMTTGVDAQTCQFIVLDANINSMIEFKQIIGRGTRIREDYGKQYFTIIDF
RGVTKLFADPDFDGDPVSVKTTTGEIPTEEEEPSDNGTCTDIENEDNNGSDVTDVNIPPD
IIDGGEINETPAKYYVNDVPVKVIHERVYYYDKDGKLITESLISYTRKNIKNEFKTLDEF
LRKWNESERKEAILKELEERGVLLEELKEEVGKDLDPFDLICHVAFDMPPLTRKERANNV
KKRNYFTKYGESAREVLEALLEKYADEGIENLENLEILKVPDFKRFGSPLEIVKKFGGKQ
KYLEAIKELEKEIYTA
NT seq 2391 nt   +upstreamnt  +downstreamnt
gtgatatttgtgaataagaaagatttatctgaaagggatatatgctccaagtacataaca
ccatccttgataaatgcaggatgggatttagaaagacaaattagagaggaagtttccttt
actgatgggagaatcattgttagaaaaaaattggttacaagaggagaaaggaaaagagcg
gactatatactctattataagtccaatatacctcttgctattatagaagcaaaagataat
aagcatccagtgggggctggtatgcagcaggctttgaaatatgcagagattctggacatt
ccatttgttttttcgagcaacggggatgcatttttggaacatgacagaactattagtgtg
ggcagtaaagaaagagaaataccacttaaccagttcccatctcccgaagaactatggagc
aggtacaagaaagcaaaagggcttagtgaaagagaagaagaaattgttacacaggaatac
tattttgaacaaaatggcaaaagcccaagatattatcagcgcattgccataaacagaacg
gtagaggcaattgccaaaggtcaaaatcgaattttgcttgtcatggctactggcacaggg
aaaacctatacagcctttcaaattatctataggctttggaagtccagggctaaaaagaga
atcttatttttagccgataggaatattttagtagaccagactatggcaaatgattttaaa
tatttcggcgataaaatgacgaaaatcaccaatagaaaaatagacaaagcccatgaaatt
tatttagccctataccaaggaatttcaggtgaagatgaatttaaaaatgtatataagcag
ttttcaccagagttttttgatttaatcattattgacgagtgccataggggaagcgccaaa
gaagattctgcttggagagaaatattagaatacttccatcctgccacccaaatagggctt
acggcaacaccgaaggaaacaaaggatgtatcaaacatagaatactttggtgaacctatt
tacacctactcattaaaacagggaatcgaagacggtttcctcgccccatacaaagtcata
agagtaatattggatagagatgtagaaggttataggccggaaaaagggaaaagggacaag
tatggctttgaaattgaggatagagaatataatataaaggattttgataaaaacttagtc
attgaaaaccggacagagattgttgccaaaaaagtgtctgattacttaaaaaagaataat
tccagatttgccaagacaattttcttctgtgtagatattgagcatgccgaaaggatgagg
caggcacttgtcaatgaaaatgcagatttagtagcagagaatcccaaatatgtcatgaga
atcacaggggataacgaagaaggcaaggctgaactggataattttatagaccctgctagc
aaataccctgttttggttacaacaagtaaattaatgaccacaggagtggatgctcagact
tgtcagttcatcgttttagatgctaatattaatagcatgattgaattcaaacaaattatt
gggagaggtacaagaataagagaggattatggcaaacagtattttaccataatagacttc
agaggagtcactaaattatttgcagacccagattttgatggagaccctgtaagcgttaaa
acaactacaggagaaattcctacggaggaagaagagccttcagataatggtacatgtact
gatattgaaaatgaagataataatggaagtgatgtcactgatgttaatattccaccagat
attatagatggaggagagattaatgaaactccagccaagtattatgtaaatgatgttcct
gtaaaggtaatacatgaaagagtttattactatgacaaggatggcaaacttataacagag
tcattaatatcttataccaggaaaaatattaaaaatgaatttaaaactcttgatgaattt
ctaagaaaatggaatgaatcagagagaaaagaagccatattaaaagaattagaagaaaga
ggagtactccttgaagaactcaaagaagaagtgggaaaggatttagacccatttgattta
atttgtcatgtagcctttgacatgcctcctctcacaagaaaagaaagggctaataatgta
aagaagagaaactactttacaaaatacggagaaagtgcaagggaagtattggaagcactg
ctggaaaagtatgctgacgaaggaattgaaaatcttgagaacctagaaatactcaaggtt
cctgattttaaaagatttggctctcctcttgaaatagttaagaaatttggtggaaagcaa
aaatatctggaagccattaaagaattagaaaaggaaatatacactgcataa

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