Herbinix luporum: SD1D_0804
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Entry
SD1D_0804 CDS
T04072
Symbol
rlmN
Name
(GenBank) putative dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsd03009
]
SD1D_0804 (rlmN)
Enzymes [BR:
hsd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
SD1D_0804 (rlmN)
Ribosome biogenesis [BR:
hsd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SD1D_0804 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CUH92352
UniProt:
A0A0K8J4D4
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All DBs
Position
I:870358..871389
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AA seq
343 aa
AA seq
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MDIKSLYMDELVETMKNMGQPAFRAKQIYNWLHAKLVESYDEMLNLPKDLRNNLKEHYPL
KTLEVVDKLVSQKDGTSKYLFSLNDDRIIESVLMKYHHGNSVCISSQVGCRMGCTFCAST
IGGKERDLTASEMLDQIYRISVMSKERVSNVVVMGTGEPLDNYDNLVRFIRILTDSQGLN
ISARNITVSTCGIPDKIYRLADEGLPITLALSLHAPNNEIRKKLMPIARQYELSDVLEAF
YYYYEKTGRRLTFEYSLVEGINDEEEHALELGELLKGYNCHVNLIPVNPIKERNYRKSDG
HKILKFKNILEKYRINVTIRREMGSDINAACGQLRKSYLDRGK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggacataaaatccttatacatggatgaattagtagagaccatgaaaaatatgggtcag
ccggcttttagggcaaagcaaatttataattggcttcatgctaaattggtagaatcttat
gatgaaatgttaaatttgccaaaagacctaaggaataacttaaaagaacactacccttta
aaaaccctagaagtggtagataagctggtttcacaaaaggacggtacaagtaagtatttg
ttttccttaaatgatgataggataatagaaagtgtattgatgaaatatcatcatggcaac
agtgtatgtatttcttcccaagtgggatgtagaatgggatgtactttttgtgcttctacc
ataggaggtaaggaaagggatcttaccgcctctgaaatgcttgatcaaatttatagaatt
tcggtgatgtccaaagaaagggtaagcaatgtagtggttatgggcaccggggagcccctg
gataattatgataatctggtacgatttatccgtatcttaaccgatagccaaggccttaat
ataagtgctagaaatattacggtttctacttgtgggatacctgacaagatataccgtttg
gcagatgagggacttcctataaccttggctctgtcattgcatgctcctaataatgaaatt
aggaagaaactaatgcccatagcaagacaatatgaactttctgatgtacttgaagcattt
tattactattacgaaaaaacaggccgaagacttacttttgaatatagtttagttgaagga
attaatgatgaagaggagcatgccctagaacttggagagcttcttaaagggtataactgt
catgttaatttaattcctgttaatccgattaaggaaagaaattataggaaatcagacggc
cataagatactaaaatttaaaaatatacttgaaaaatatagaataaatgttactattaga
agagaaatgggctcagatattaatgctgcctgtggacaactcagaaagagttatttagac
aggggcaagtag
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