Herbinix luporum: SD1D_0839
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Entry
SD1D_0839 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02409
flagellar M-ring protein FliF
Organism
hsd
Herbinix luporum
Pathway
hsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SD1D_0839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsd02044
]
SD1D_0839
02035 Bacterial motility proteins [BR:
hsd02035
]
SD1D_0839
Secretion system [BR:
hsd02044
]
Type III secretion system
Flagellar export apparatus
SD1D_0839
Bacterial motility proteins [BR:
hsd02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
SD1D_0839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
MscL
ALGX
Motif
Other DBs
NCBI-ProteinID:
CUH92387
UniProt:
A0A0K8J4G8
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All DBs
Position
I:909612..911207
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AA seq
531 aa
AA seq
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MAERLKQIPKQLLEIWNKYTAKQKTILISVISAIFIAFLVLVYVTNKVEYEELTITETTK
EASEVIELLKSEGIKYKLGSDRLTVSVDLKRYSDAVLLLASNDMPSTGLSLDELLNNSLS
TTNSDRNLKLNLYLQNQLKKYIESMEGVQDAEVYYIPVDDSNSILTTQRETSASVLLKVD
KNFKPETAETIAEVVAAVIGNSTTDNIKVADQNGNLHFGGAKDLYTGNASSKEEYREMLR
NTFINNLYMGLIKRGFDDVVIMPNLSLDFKKVQELYTEYLPAEGQDQGVYSHSYTYNSEN
AGSYGAGVPGTSSNDETDYMIEDSSNTSGNVKIEEFDYLPNERVTNIEYEVGAIIPEESS
VSILLRKIVTRTEEDLESEGLLDEMSFDEYVRLNSEGRKLELDPDIVSMVSMATGISENN
IQITAIEQPVYVPKVIEYREWTDYLQIILAVLIVALLLFVVIKALKPVEVTELEPELSVE
ELLATTKEAQPIDDIEFNEVSEVRKVIEKIVDEKPDAVAQLLRNWLNEDWE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaggctgaaacaaataccaaaacaactattggaaatttggaacaaatataca
gcaaaacaaaagacaattttaatcagtgtgattagtgcaatttttatagcgtttttagta
ttagtttatgtaactaataaagttgaatacgaagaattaactattaccgaaacaactaaa
gaggctagtgaagttatagaattgttaaagtcagaaggtattaaatataaattaggttct
gaccgcttaactgtctcggtagatttaaaaagatattctgatgcggtgttattgctcgcc
agtaatgatatgccttctacaggtctatccctagacgagctattaaataacagtcttagt
acgacaaatagtgatcgtaatcttaaattaaatctctatttacaaaatcaattaaaaaaa
tatatagagagcatggaaggagttcaggatgcagaggtttattatataccggtggacgac
agtaattccatattaaccacccagagagaaaccagtgccagtgtactccttaaagttgat
aaaaattttaagccagagactgctgaaaccattgcggaagtagtggctgcggtaattgga
aatagtactacggataatataaaggttgcagatcaaaacggtaacttacattttggtggt
gccaaggacttatatactggaaatgcatcatctaaggaagagtaccgggaaatgcttcgt
aatacctttattaataatttatatatgggcttaatcaaacggggatttgatgatgtggtt
attatgcccaatctatcattagattttaagaaggttcaggaattatacactgaatatctg
ccggcagaaggccaagatcaaggtgtatacagtcatagctatacctataattcggaaaat
gccggatcatatggtgcaggtgttccggggacttcttccaatgatgaaacggattatatg
atagaggattcatcaaacacctcaggtaatgtaaaaattgaagaatttgattatttaccc
aatgaaagggtaaccaatatcgaatatgaagtaggtgcaattataccggaggaatcttcc
gtaagtattttgcttcgtaagattgtcacccgtaccgaagaggatttagagtctgaggga
ctactagatgaaatgagttttgatgaatatgtcagattaaatagtgaaggaagaaaacta
gagctagatccggatattgtatctatggtatccatggcaacaggtatatcggaaaataat
atacagataacggctatcgaacaaccggtatatgtaccaaaggtgattgaatacagagaa
tggaccgattatctacagattatactggcggtgttaatagtagccttattactatttgta
gtaattaaggctctgaaaccggttgaggttactgagcttgagccggagttgtcagttgaa
gaacttctggctaccaccaaggaggctcagcctattgacgatattgaatttaatgaggtt
tctgaggtacgtaaggtaattgagaaaattgttgatgagaagccggatgcggtggcacaa
ctacttcgcaactggttaaatgaggattgggagtaa
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