Herbinix luporum: SD1D_0949
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Entry
SD1D_0949 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsd03019
]
SD1D_0949
03009 Ribosome biogenesis [BR:
hsd03009
]
SD1D_0949
Messenger RNA biogenesis [BR:
hsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD1D_0949
Ribosome biogenesis [BR:
hsd03009
]
Prokaryotic type
rRNA processing factors
SD1D_0949
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
CUH92496
UniProt:
A0A0K8J4A3
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All DBs
Position
I:1029022..1030254
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AA seq
410 aa
AA seq
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MSHKIIITRQDHTIISALFEGKDMVQVSLNPDNEENILGNIYLGKVKNIVKNINAAFVEI
EEGRMCYFSMKENPYPILANQACDDKEASLKETQIKIGDELIVQVTKEDVKTKAPVVSSN
INLTGKYVALTYGKTSIGVSKKIEDQAERQRLRSLVKPYVSKEFGFIVRTNSAYMSDQLI
INEINNLIETFKNIRRYGVHKSRFSLLYSTPPAYICDIRDGYADRVDEFVTDDARLYENI
KEYLTQHQPEDMAKLRLYQDDNISLWTLYGIKEKLKEALKPKVWLKSGGSLIIQPTEALT
AIDVNTGKAVAGKKKVQETFLKINLEAAKEIAKQIRLRNLSGIIIIDFIDMELEKDKELL
MRELEEYLKKDPIKTTLVDMTALGLVEVTRMKLRKPLHEQLPFIDTILQQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataagattattattacaaggcaagatcatactataatctctgcattatttgaa
gggaaggatatggtgcaagtatccctaaatcctgataatgaggagaatattctaggcaat
atttatcttggtaaagtaaaaaatattgttaaaaacataaatgctgcctttgttgaaatt
gaagagggcaggatgtgttacttttcaatgaaggaaaatccctatcccatccttgccaat
caggcctgtgatgataaggaagcttcccttaaggaaactcagattaagataggtgatgag
ctgattgttcaggttaccaaggaagatgttaagaccaaggcacctgtagtcagctccaat
atcaacctgaccggaaaatatgtagctttaacctatggaaaaacctctattggagtatcc
aaaaagattgaggatcaagcagagcggcagagacttcgatcattggtaaaaccctatgtc
agtaaggaatttggttttatagtcagaactaattcagcttatatgtctgatcaattgata
attaatgaaataaataatcttatagaaacttttaaaaacataagaagatacggagttcat
aaaagcagattttcattattatatagtacaccaccggcttatatttgtgatattagagac
ggatatgcagatagggttgatgaatttgtaaccgatgatgcaaggctttatgaaaatatt
aaggagtatctgacacaacatcagccggaagatatggcaaagttaagattatatcaagat
gataatataagcttatggaccctctatggaattaaggagaagctaaaggaggcacttaag
cccaaagtttggttaaaatcagggggttctcttataattcagcccacggaagccttaacg
gcaatagatgtcaatacaggaaaggcagtggcaggaaagaaaaaggttcaagaaaccttt
ttaaagatcaatttagaagcagcaaaagaaattgcaaaacaaatacggttacggaattta
agcggaataattataattgattttatcgatatggaattagaaaaagataaagagttacta
atgagagaactagaagaatatctaaaaaaagatccaattaaaacaacccttgtggatatg
acagccttaggtttagtagaggttacaagaatgaagctaagaaaacctttacacgaacag
cttccttttatcgatactatacttcaacaatga
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