KEGG   Herbinix luporum: SD1D_1025
Entry
SD1D_1025         CDS       T04072                                 
Name
(GenBank) hypothetical protein
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
hsd  Herbinix luporum
Pathway
hsd03030  DNA replication
hsd03430  Mismatch repair
hsd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SD1D_1025
   03430 Mismatch repair
    SD1D_1025
   03440 Homologous recombination
    SD1D_1025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsd03032]
    SD1D_1025
   03400 DNA repair and recombination proteins [BR:hsd03400]
    SD1D_1025
Enzymes [BR:hsd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SD1D_1025
DNA replication proteins [BR:hsd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SD1D_1025
DNA repair and recombination proteins [BR:hsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SD1D_1025
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_delta AdoHcyase_NAD DUF7447
Other DBs
NCBI-ProteinID: CUH92572
UniProt: A0A0K8J522
LinkDB
Position
I:1107761..1108738
AA seq 325 aa
MKSIKEDIKTGSFKQFYLLYGSEAYLLKLYRDKLRDGILGKSDQMNYSRFEGKDIDLKEV
NDIAQTLPFFNEKRLILIENSGLFKVQSDLSEILKNAPDSTFFIFVENEIDKRNKVFKLI
KDRGSISEMNGLDEKNLKLFIGSLLKPSGKKITMNTADYLLERTGTDMENICNEIDKLIS
YTGDRDIITLEDIDEIVTPQITGKIFQMMDAIGLKQQDRALSLYYDLLSVRERPSHILYL
IMRHFNILLQVKELAANGYGTSLITQKVSIPAFTVGKYISQSRNFTKNQLTYALKLAADT
EEQIKTGRIHEKIGTELLIIQFSSK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgaaatcaattaaagaagatatcaaaacaggcagctttaaacagttctacctgctttat
ggtagtgaggcttatttgttaaagctttaccgggataaattaagagatggaatattagga
aaatcagatcagatgaactattctagatttgaaggaaaagatattgatttaaaagaggtt
aatgatatagcacaaacattacccttttttaatgaaaaaagattaatactcatagaaaat
agtggtttatttaaagttcaaagtgatctttcagaaattcttaaaaatgcccctgacagt
acattttttatttttgtcgaaaatgaaatagataaaagaaacaaagtatttaaactgata
aaagaccggggtagcatatcagaaatgaatgggttagatgaaaagaacttaaagttattt
ataggatctttattaaagccttccggaaagaagattactatgaatactgcagactattta
ttagaaagaaccggtacagatatggaaaatatctgtaatgaaatagataagctaattagc
tatacaggagacagagatattattactttagaagatatagatgaaatagttacaccacag
attacaggaaagatatttcagatgatggatgccataggcttaaagcaacaggatagggct
ttgtcattatactatgatttattatcagttcgggaaaggccttctcatattctgtattta
attatgagacattttaatatactgttgcaggtaaaggagttagcagctaacggatatgga
acctcccttattacacagaaggtatcgattccggcctttacagtaggtaaatatataagt
caatctagaaactttacaaaaaatcagctgacatatgccttaaaactggctgcagatact
gaggaacagataaaaaccggcagaatacatgaaaagataggaactgaacttttaataatt
caatttagctcaaaataa

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