Herbinix luporum: SD1D_1069
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Entry
SD1D_1069 CDS
T04072
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsd03016
]
SD1D_1069 (miaB)
Enzymes [BR:
hsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SD1D_1069 (miaB)
Transfer RNA biogenesis [BR:
hsd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SD1D_1069 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
CUH92615
UniProt:
A0A0K8J560
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All DBs
Position
I:1154686..1156131
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AA seq
481 aa
AA seq
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MENNININKIEADKQLEIIKELNQRFEEEYEKTGIRKTYHIVTFGCQMNSRDSEKISGIL
KQIGYVETDTEDADFVIYNTCTVRENANNRVYGRLGHLGTLKKKRPGMLIALCGCMMQEN
TTVEKIKESYRFVDIIFGTHNIFKLAELIKIRLDNEETGGKQSDLMVVDLWKDTDMIVEN
LPNDRKYPFKAGVNIIFGCNNFCSYCIVPYVRGRERSRNPQDIIEEVKKLASEGVIEVML
LGQNVNSYGKNLNPPMSFAKLLLEIEKIEGIERIRFMTSHPKDLSQELIDVMGASKKICK
HLHLPLQSGSSRLLKIMNRRYTKEDYLDLVERIRKAVPDISLTTDIIVGFPGETEEDFLE
TLDVVKKVRFDNAFTFLYSKRTGTPAAIMENQVEEKVAKERFDRLLAEIQNSAAKSSSRY
EHTIQDVLVEEVNTQDENLLTGRLSNNMLVHFAGDKSLIGKLIPVYLEESKGFYYIGSQV
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaataatataaatataaataaaattgaagcagataaacagctggagattataaaa
gagctaaatcaaagatttgaagaagaatatgaaaaaacaggaattagaaaaacttatcat
attgtaacctttggctgccaaatgaacagccgggattcagagaaaatatccggtatctta
aaacaaatcggctatgtagaaaccgatactgaggatgcagattttgttatatataatacc
tgtacggtcagagaaaatgccaataaccgtgtatatggcagattaggccatttaggtacc
ttaaaaaagaaaagacccggtatgctgattgctttatgtggctgcatgatgcaggagaat
actacggtagaaaaaatcaaagaaagttatcgtttcgtagatataatttttggtacccat
aatatatttaaactggctgaactgattaaaatccgattggataatgaagaaaccggcggt
aagcaatctgacctgatggtagtagatttatggaaagatacagatatgattgttgaaaat
ctgcccaatgataggaaatatccttttaaggcaggagttaatattattttcggttgcaat
aatttctgtagttactgtattgtaccttatgtaaggggaagggaaagaagtcgtaatcca
caggacattatagaagaagtaaaaaaattagcctcagagggtgtaattgaggtaatgttg
ctggggcaaaatgttaattcttatggtaaaaaccttaatccacctatgagttttgccaag
cttcttttagagattgaaaagattgagggtatagaaagaattagatttatgacttctcat
cccaaggatctttcacaggaattaattgatgtaatgggtgcttctaaaaagatttgcaag
catcttcatcttcctttgcaatcgggcagttcaagattattaaaaattatgaatcgtaga
tataccaaggaagactatcttgatttggtagaaagaatacgaaaagccgttccggatata
tccttaactacggatataatagtaggctttcccggtgaaacagaagaggatttccttgaa
accttggatgtagtaaaaaaggttagatttgataatgcctttaccttcttatattctaaa
cgtacaggaacacctgccgccatcatggaaaatcaggtagaagagaaagtagccaaagaa
agattcgatagacttttagctgaaattcaaaattcagctgcaaaatcttcttcaagatat
gagcataccattcaagatgtcttagttgaagaggttaatacacaggatgaaaacttactt
acaggtaggttaagtaataatatgctggtgcattttgccggtgataaaagcctaattgga
aaactaattccggtatatttagaagaaagtaaaggattttattatataggttcacaagta
aaataa
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