KEGG   Herbinix luporum: SD1D_1104
Entry
SD1D_1104         CDS       T04072                                 
Name
(GenBank) hypothetical protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hsd  Herbinix luporum
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SD1D_1104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsd03019]
    SD1D_1104
   03009 Ribosome biogenesis [BR:hsd03009]
    SD1D_1104
   03036 Chromosome and associated proteins [BR:hsd03036]
    SD1D_1104
Enzymes [BR:hsd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SD1D_1104
Messenger RNA biogenesis [BR:hsd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SD1D_1104
Ribosome biogenesis [BR:hsd03009]
 Eukaryotic type
  90S particles
   RNase
    SD1D_1104
 Prokaryotic type
  rRNA processing factors
   SD1D_1104
Chromosome and associated proteins [BR:hsd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SD1D_1104
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_MRPL44 DSRM_2 DUF8031 Ribosomal_S5 Dicer_dimer DUF6514
Other DBs
NCBI-ProteinID: CUH92650
UniProt: A0A0K8J5B5
LinkDB
Position
I:1192621..1193328
AA seq 235 aa
MSKARKPKTSIALLEKKIDYHFNDSALLLQALTHSSYANEMRMNKENNNERLEFLGDAVL
ELVTSEYVFKSHNHLPEGDLTKLRASIVCEQSLSSCAKDLNIGDFLLLGKGEELSGGRHR
ESILSDALEAIIGAIYLDGGFTNAKEFVHKFILNNVEHKELFFDSKTILQEIIQNDNNKQ
KIRYKLISEEGPDHNKSFTIALYVGNEQYGCGIGKTKKAAEQEAAMQAIKKLQKK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagtaaagctagaaaacctaaaacctccattgctttattggaaaaaaagattgattat
cattttaatgattctgccttgcttcttcaagccttaacccacagttcttatgccaatgaa
atgaggatgaacaaagaaaacaataatgaacggcttgagtttcttggagatgctgtactg
gagcttgtcaccagtgagtatgtatttaaaagtcataatcatttaccggagggagatctt
acaaagcttagagccagtatagtttgtgaacaatccttatcatcctgtgcaaaagatttg
aatataggtgatttcttacttcttggtaaaggagaagaactttcagggggacgccatagg
gagtctattttatcggatgccctagaagctataatcggtgctatttaccttgacggtggt
tttactaatgcaaaagagtttgttcataaatttatccttaacaatgtagaacataaggaa
ctctttttcgatagcaagactatcttacaggaaatcattcaaaatgataataataagcaa
aaaatccgttataagcttatatcagaagaaggccctgatcataacaaatcctttactatt
gctttatatgtaggcaatgagcaatatggttgtggtataggtaaaactaaaaaagcagca
gaacaagaagctgccatgcaggcaattaaaaagcttcaaaagaagtaa

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