Herbinix luporum: SD1D_1104
Help
Entry
SD1D_1104 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SD1D_1104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsd03019
]
SD1D_1104
03009 Ribosome biogenesis [BR:
hsd03009
]
SD1D_1104
03036 Chromosome and associated proteins [BR:
hsd03036
]
SD1D_1104
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SD1D_1104
Messenger RNA biogenesis [BR:
hsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD1D_1104
Ribosome biogenesis [BR:
hsd03009
]
Eukaryotic type
90S particles
RNase
SD1D_1104
Prokaryotic type
rRNA processing factors
SD1D_1104
Chromosome and associated proteins [BR:
hsd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SD1D_1104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DSRM_2
DUF8031
Ribosomal_S5
Dicer_dimer
DUF6514
Motif
Other DBs
NCBI-ProteinID:
CUH92650
UniProt:
A0A0K8J5B5
LinkDB
All DBs
Position
I:1192621..1193328
Genome browser
AA seq
235 aa
AA seq
DB search
MSKARKPKTSIALLEKKIDYHFNDSALLLQALTHSSYANEMRMNKENNNERLEFLGDAVL
ELVTSEYVFKSHNHLPEGDLTKLRASIVCEQSLSSCAKDLNIGDFLLLGKGEELSGGRHR
ESILSDALEAIIGAIYLDGGFTNAKEFVHKFILNNVEHKELFFDSKTILQEIIQNDNNKQ
KIRYKLISEEGPDHNKSFTIALYVGNEQYGCGIGKTKKAAEQEAAMQAIKKLQKK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagctagaaaacctaaaacctccattgctttattggaaaaaaagattgattat
cattttaatgattctgccttgcttcttcaagccttaacccacagttcttatgccaatgaa
atgaggatgaacaaagaaaacaataatgaacggcttgagtttcttggagatgctgtactg
gagcttgtcaccagtgagtatgtatttaaaagtcataatcatttaccggagggagatctt
acaaagcttagagccagtatagtttgtgaacaatccttatcatcctgtgcaaaagatttg
aatataggtgatttcttacttcttggtaaaggagaagaactttcagggggacgccatagg
gagtctattttatcggatgccctagaagctataatcggtgctatttaccttgacggtggt
tttactaatgcaaaagagtttgttcataaatttatccttaacaatgtagaacataaggaa
ctctttttcgatagcaagactatcttacaggaaatcattcaaaatgataataataagcaa
aaaatccgttataagcttatatcagaagaaggccctgatcataacaaatcctttactatt
gctttatatgtaggcaatgagcaatatggttgtggtataggtaaaactaaaaaagcagca
gaacaagaagctgccatgcaggcaattaaaaagcttcaaaagaagtaa
DBGET
integrated database retrieval system