Herbinix luporum: SD1D_1347
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Entry
SD1D_1347 CDS
T04072
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hsd
Herbinix luporum
Pathway
hsd00730
Thiamine metabolism
hsd01100
Metabolic pathways
hsd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SD1D_1347 (thiC)
Enzymes [BR:
hsd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SD1D_1347 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
CUH92893
UniProt:
A0A0K8J6D7
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Position
I:complement(1446117..1447421)
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AA seq
434 aa
AA seq
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MREYATQMEAARKGIITEELKKVAEKELMTVEELMPLVAAGKVVICANKNHKSIDPQGIG
SMLKTKINVNLGVSRDCNDYDMEMTKVMEAVNMGAHAIMDLSSHGDTTAFRRKLVSECPV
MIGTVPVYDAVIHYQRDLDRLTAKDFIEVVRLHAEDGVDFVTLHCGITRNTIEQIKKYKR
KMNIVSRGGSLVFAWMSMRGEENPFYQYFDEILDICREYDVTISLGDALRPGCLADASDV
CQIEELVRLGELTKRAWEKDVQVMVEGPGHMPIDQIEANMKIQQTICQGAPFYVLGPLVT
DIAPGYDHITAAIGGAIAASAGAAFLCYVTPSEHLALPNLEDVKQGIIASKIAAHAADIA
KGVRGARKIDDKMAEARRIFDWETQWQCAIDPETAKKIRAERKPEHEDTCSMCGKFCAVR
SMNKALAGEYIDIL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagggaatatgcaacccagatggaagcagcaagaaaaggtattattactgaggaactg
aaaaaagtagctgaaaaagagctaatgacggtagaggaactaatgcctttagttgcagct
ggaaaagtagtaatatgtgcaaacaaaaatcataaatctatcgatccccagggaataggt
tcgatgctgaaaacaaagataaatgtaaacttgggagtttcaagggactgtaatgattat
gatatggaaatgacaaaagttatggaagccgtcaatatgggtgcccatgctatcatggat
ttatcttcacatggagatactactgcctttcgtagaaagttagtatcggaatgtccggtt
atgataggaactgtgccggtatatgatgctgttatacattatcagagagatttagatagg
cttacagcaaaagattttattgaagtagtaagactccatgctgaggatggagtagatttt
gttaccttgcactgtggtattacaagaaatacaatagaacagataaagaaatacaaaaga
aaaatgaacattgtatctagagggggatctcttgtatttgcttggatgtccatgagggga
gaagaaaatcctttttatcaatacttcgatgaaattctagatatatgccgtgaatatgat
gtaacaatatcactaggtgatgctttaagacccggttgtcttgctgatgcatcagatgta
tgccagattgaggaattggttaggcttggtgaacttaccaaaagagcttgggaaaaggat
gtccaggtaatggtagagggacccggccatatgcccattgaccaaatagaagccaatatg
aaaattcagcaaactatctgccagggggcacccttttatgtattaggccccttggtaacg
gatatagcacctggttatgaccatataacagctgcaatcggaggtgctattgcagcctca
gccggagcagcttttttatgttatgtaacaccttcagaacacctggctttaccaaattta
gaggatgtgaagcagggaattatagcctcaaagattgctgcccatgcagcggatatagcc
aagggtgtaagaggggcaagaaagattgatgataaaatggcagaagcaagaagaatattt
gattgggagacacagtggcagtgtgcaatagatccggaaacagcaaaaaaaatccgtgct
gaaaggaagcctgaacatgaagatacctgttccatgtgcggcaagttttgtgcagtaaga
agtatgaacaaggcacttgcaggagaatatattgatattttgtaa
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