KEGG   Herbinix luporum: SD1D_1355
Entry
SD1D_1355         CDS       T04072                                 
Name
(GenBank) hypothetical protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
hsd  Herbinix luporum
Pathway
hsd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SD1D_1355
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hsd02000]
    SD1D_1355
Transporters [BR:hsd02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    SD1D_1355
SSDB
Motif
Pfam: SBP_bac_5 DYN_lid
Other DBs
NCBI-ProteinID: CUH92901
UniProt: A0A0K8J5F0
LinkDB
Position
I:complement(1453474..1455081)
AA seq 535 aa
MLTKKLTKVLLLITVFTIALYGCSGDKEDTDKSKTPANGKLSFAEPVEAAKSEPTYGGSI
TVGITQDLDGLDPHKALSAGTKEVLFNIFEGLVKLDYNGNLVPAVAESYHISEDGMLYTF
TLREGVKFHDGRLVTAQDIVYSIKRCAGMLEPKDPTVIVESALSVISDVTSIDEKTIEIR
LKQVDTELLPYLACSIVPRDYDQLDTKPIGTGPFKFVSYTPLQNIVLEKNEEYYMEGVPY
LDRVTFKISSNTDAAFMELQGGNIDILPYITDSQASKLPSGYHMESGPMNLIQGLFINNK
VEPFDNKLVRQALCYGIDRQAVIDMVAGGRGDVIGTNMYPGFKKYYDESLVNTYPYNPEK
AKELLKEAGYPHGFKFTITVPSNYQYHIDTAQVIVEQLKQIGITAQIQLIEWTSWKSDVY
KGRNYETTVVGLAAELAPRQALARFYSDAENNFMNYINPEFDTLYKQGEIETAEDKKIQL
YKQMQAMLTNDAVAVYIQDPHQMTAVSDKLGGYTYYPIYVQDMSLVYYKKGMESD
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgcttacaaaaaaactgactaaagtattacttcttattacagtatttactattgcactc
tacggatgtagtggcgataaggaagatacggataagagtaaaactcctgcgaatggtaaa
ttgtcttttgctgaacctgtggaagcggcaaaatcagagccgacttatggaggttcaatc
acagtaggaataacccaggatttggatggtcttgacccgcacaaagcattgtcggcagga
actaaagaggttttattcaacatttttgagggcttagtaaagcttgattataatgggaat
ttagttccggctgtagcagaaagctatcatatttcagaagatggaatgctttataccttt
accctacgggaaggtgtgaaatttcatgatggcaggcttgttacagcccaagatatagta
tattctataaaaagatgcgccggaatgctagaaccgaaagatccaacggttatagtagaa
tcggcgctttctgttatttctgatgtgacaagcatcgatgaaaagacaattgaaattcgc
ttaaagcaggtagatacagagctgcttccatatttagcatgttctatagtgccaagggat
tatgatcagttggataccaagcctattggtaccgggcctttcaagtttgtatcctataca
cccttacagaacattgtcttagaaaaaaatgaggagtattatatggaaggggtgccttat
ttggacagggttaccttcaagatatcatctaatacagatgctgcatttatggaacttcaa
gggggaaatattgatattcttccatatattactgactctcaagcctccaagcttccaagt
ggataccatatggaatcaggaccaatgaatctgattcagggactatttattaataataag
gtagaaccttttgataataagctggtcagacaggctctgtgctacggaatagataggcag
gctgtaattgatatggtagcaggaggtcggggagatgtaatcggaaccaatatgtatccc
ggatttaagaagtattatgatgaaagccttgttaatacctatccatataatcccgaaaag
gctaaggaattattaaaagaagcagggtatccccatggatttaaatttacaataacagtt
ccttcaaattatcagtatcatattgatactgctcaggtcatagtggaacagctaaagcag
attggtattacagcccagatacagttaattgaatggacaagctggaagtctgatgtatat
aaaggcagaaactatgagacaaccgttgtaggacttgctgcagaactggcaccaaggcag
gctttggctcgtttttactcggatgcggaaaataattttatgaactatatcaacccggaa
tttgataccctttataagcaaggggaaatagaaacagcagaagataaaaagatacagcta
tataagcaaatgcaagctatgctaaccaatgatgctgttgcagtatatattcaggatccc
catcagatgactgcagtcagtgataaattagggggctatacctattatccgatttatgtt
caggatatgtcactggtctattataaaaaaggaatggaatccgattaa

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