Herbinix luporum: SD1D_1435
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Entry
SD1D_1435 CDS
T04072
Name
(GenBank) putative membrane protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
hsd
Herbinix luporum
Pathway
hsd00550
Peptidoglycan biosynthesis
hsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD1D_1435
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsd01002
]
SD1D_1435
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
SD1D_1435
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD1D_1435
Peptidases and inhibitors [BR:
hsd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SD1D_1435
Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SD1D_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Arm_4
Motif
Other DBs
NCBI-ProteinID:
CUH92981
UniProt:
A0A0K8J5M5
LinkDB
All DBs
Position
I:complement(1538151..1539125)
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AA seq
324 aa
AA seq
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MVRKIKKKKSGIREFVIFLLIVVVFAFVFKFIITPGNQHEFEKEYVDKTTPIPSSEIEPD
SSISISPDKLNSTNAILIRLKDQTTLMQKNSEEKIYPASLTKMMTAIVAIENLTNLQKEI
QLTHYTFNGLYSANASMAGFQPGEKVRAIDLLYGVMLPSGAEACIGLADQIAGSEQDFVA
MMNQKAADLGMDNTHFENTTGLHNENHYTTVKDLAVLLSYALQNDTFREIFTSSRHSTQP
TNKHPGGITFNNTMFEKLNNQNIIDGEILGGKTGYTDEAGLCLASLAKVGHQEYILITAG
AKGDIYSEQYNITDALAVYNRIGK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggtacgaaaaataaaaaagaaaaagtcaggaatacgcgaatttgtaatatttttattg
atagttgttgtttttgcttttgttttcaaattcatcattactccgggaaaccaacatgag
tttgagaaagaatatgtcgataaaacaacgcctattccctcgtcagagatagaacccgat
tcctctatttctatatctcccgataaactgaacagtactaatgcgattctgatccgttta
aaagatcaaaccactctgatgcaaaaaaatagcgaggaaaagatctatcctgcttcattg
actaaaatgatgacagctattgttgctatagaaaatttgacaaatttgcagaaagaaata
caacttacccactatacctttaatggtctttacagtgctaatgcttctatggccggtttc
cagccaggtgagaaggtaagggctattgaccttttatacggggtgatgcttccaagtggt
gcagaagcttgtattgggcttgcggatcagattgctggttcggagcaggactttgtagct
atgatgaatcaaaaggcggcagatctagggatggacaacactcattttgaaaataccacc
ggacttcacaatgaaaaccactacacaacagtgaaagatctggctgttcttctaagctat
gctttgcaaaatgatactttcagggaaatttttacttcgtctcgtcattccacacaaccc
acgaataagcaccctggagggataacctttaacaataccatgtttgaaaaactcaacaat
caaaacattattgatggagaaattttaggagggaaaactggatataccgatgaagctggt
ctgtgtcttgcgagtcttgcaaaagtgggtcaccaagaatatatattgattacagctggt
gcaaaaggagatatctattctgaacaatataatattaccgatgcattagctgtatacaat
agaattgggaaataa
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