Herbinix luporum: SD1D_1475
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Entry
SD1D_1475 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K06400
site-specific DNA recombinase
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
SD1D_1475
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
DUF6586
Microtub_bd
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
CUH93021
UniProt:
A0A0K8J5R7
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Position
I:complement(1568986..1570557)
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AA seq
523 aa
AA seq
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MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK
NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI
RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ
VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK
WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM
QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV
SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLQKNIATVFNEENDNATDD
IDGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL
NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtgagtagaaatgtcacagtgattccggcaattaaacgagtcggaaataataaa
actagtgagagcaaacccaaaatacgagtggctgcttactgtcgtgtttcaacggatagt
gaggagcaggcttcaagttatgaaattcagattgaacattatacaaactatattaagaaa
aacaaggaatgggaattggcagggatttttgcggatgatggtatcacaggtacaaatacc
aaaaagcgtgaagagttcaaccgcatgattgaggaatgtatggcaggaaaaatagacatg
atcattacaaaatccatcagccgatttgccagaaacacgttagactgccttaaatacatc
cgtcagttaaaagataaaaacatcgctgtattctttgaaaaagaaaatatcaacaccatg
gattccaagggtgaaattatgctgactattatggcttcccttgcccaacaggaaagccaa
tccttaagtcagaacgttaagctgggcattcagtatcgatatcaacaaggtgaagtccag
gtcaaccataagcgtttccttggatacaccaaggatgaaaacaagcaactagtcatcgac
cccgagggtgcagaggttgttaaacggatttatagagagtaccttgaaggagctagtctt
ttacaaatatcaagaggactagaagcagacggtattcttacagcggcaggcaaagccaaa
tggagaccagaaacactaaaaaagatattgcagaatgaaaagtacatcggtgatgccctt
ctacaaaagacatatacggttgatttcctttctaaaaagcgggtcaagaataacggcatc
gttccccagtattatgtagaaaacagccatgagccgattattccaagggagctttttatg
caagttcaagaagagatggttcgaagagcaaatcttcgtggccgcaaaggcggtaaaaag
cgagtctatagcagcaagtatgctttatcgagtattgtttactgcggacactgcggcgat
atttaccgacgggtacattggaataacagaggctacaagtctattgtttggagatgtgtc
agtcgtttagaggaaaaaggctctgaatgcactgctcctaccataaacgaggaaacattg
cagacagcagtggtcaaggctattaacgagcttttggctaacaaagaacccttcctctca
accttgcagaaaaacatagctactgtatttaatgaagaaaatgataatgccaccgatgat
attgatggcaaattggaagaattacaacaacagcttcttatacaagcaaagtccaagaat
gactatgaagatgtggctgatgaaatttaccgccttcgagaattgaagcaaaatgcactt
gcagagaatgcagagcgtgaaggaaaaaggcaacgaatcgctgaaatgactgatttctta
aatgaacaatcctgcgagttggaggaatatgatgagcaattagtaaggcggcttattgaa
aaagttacggtatttgatgataagctcactgttgaatttaaatcaggtgttgaaatagat
attgagatatag
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