Herbinix luporum: SD1D_1601
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Entry
SD1D_1601 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02652
type IV pilus assembly protein PilB
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsd02044
]
SD1D_1601
02035 Bacterial motility proteins [BR:
hsd02035
]
SD1D_1601
Secretion system [BR:
hsd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SD1D_1601
Bacterial motility proteins [BR:
hsd02035
]
Pilus system
Pilus assembly proteins
SD1D_1601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
FtsK_SpoIIIE
AAA_14
AAA_29
AAA_16
Rad17
ABC_tran
AAA_11
ATPase_2
AAA_7
nSTAND3
AAA_19
RsgA_GTPase
AAA_30
MMR_HSR1
DUF87
RNA_helicase
AAA_23
NTPase_1
AAA_18
AAA_2
ResIII
NPHP3_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CUH93147
UniProt:
A0A0K8J753
LinkDB
All DBs
Position
I:complement(1705920..1707449)
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AA seq
509 aa
AA seq
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MEVLEFQLGIPFIDLNEIEIPPDVQRLIPFQLIYRHNVVPVKVERTLLYVAMEDPLNFIA
IEDLRMATNYEIVPVISFSDAIKRTINRLYGSQTADKAIQEFQQEKEKSSISSQNLQNIS
SLEVDSAPIVRLVNSTIEQAALSGASDIHIEPLENEVRVRFRVDGRLQLTQTIPKEAQSA
VVTRVKILCGLDIAEKRIPQDGRCDYRFKDKILNLRISVLPTVHGEKIVMRILDKTNFLI
PKEKLGFTQENLAKFDELLKNPHGIILVTGPTGSGKSTTLYTMLSELNKVTDNIMTVEDP
VEYMIDGLNQVQVNAKAGLTFAGALRAFLRQDPDIIMLGEIRDSETVEVAIRAAITGHLV
LSTLHTNDAVSSISRLIDMGVPPYMIAVSLMGIISQRLVRRLCTHCAESYIPPEHEVRFL
GLPPGDYYFRKPVGCALCNDTGYKGRIAVHEILIVTKDMRDMIAANMSNNALQEYAINNG
MTTLKQESIRLILDGITSFNEVMDITFSI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttagagtttcaattgggaattccctttatagacctcaatgaaattgagatt
cctccagatgtacaaagacttattccatttcaattaatatatcgtcataatgtagtacct
gtgaaggtagaacgtacattattgtacgttgccatggaagatccactgaactttattgct
attgaagacttacgaatggctactaactatgagattgttcctgttatttcatttagtgat
gctataaaaagaacaataaatagattatacggcagtcaaactgcagataaagctattcaa
gagtttcaacaggaaaaagaaaaaagtagtatatcaagccaaaacttacaaaatattagt
tctcttgaagttgacagtgctcccattgtaagacttgttaattctactatagaacaagcg
gcattaagcggagccagtgatatacatattgaacctttggaaaatgaagttagagtacgt
tttcgtgtggacggtagactgcagctaacacaaaccatacctaaggaagcacaatctgct
gttgttaccagagttaaaatattatgtggtttagatatagcagaaaaaagaatacctcag
gatggccgttgtgactatagattcaaggataaaatcttgaatttaagaatttcagtcctg
cccacggtacatggtgagaagattgttatgcgtattttggataaaacaaacttccttata
ccaaaggaaaaattgggattcacccaagaaaacttagcaaagtttgatgagttgctaaaa
aatccccatggtattattttggttaccggccccacaggaagcggtaaatcaacaacctta
tataccatgttaagcgagttaaataaagtcactgataatataatgactgttgaagatccc
gtagaatatatgattgacggcttaaatcaagtgcaggtaaatgcaaaagcaggacttact
tttgcaggagctttaagagcatttctaagacaggatccggacatcattatgttaggtgag
attagagattcagaaactgtagaagtagccattagagctgccataaccggccacttggtt
ctaagtaccttacatactaatgacgctgtaagttcgatttcaagactaatcgacatggga
gtacctccatatatgatagcggtttctcttatgggcattatctcacaaagattagtacga
aggctatgtacccactgtgcagaaagctatattccacctgaacatgaggtgaggtttttg
ggactgcctccgggagattattattttaggaaacctgtaggttgtgccttatgtaacgat
accggctacaaaggcagaatagctgttcatgagattcttattgttacaaaagacatgagg
gatatgatagcagctaatatgagtaataatgctcttcaagaatatgctatcaataatgga
atgactaccttaaagcaggagagcatccgtttaatattggatggtataacttcctttaat
gaggtaatggatataacattttcaatttaa
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