Herbinix luporum: SD1D_1702
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Entry
SD1D_1702 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
hsd
Herbinix luporum
Pathway
hsd00550
Peptidoglycan biosynthesis
hsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD1D_1702
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsd01002
]
SD1D_1702
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
SD1D_1702
Enzymes [BR:
hsd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD1D_1702
Peptidases and inhibitors [BR:
hsd01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
SD1D_1702
Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SD1D_1702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
CUH93247
UniProt:
A0A0K8J7F8
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All DBs
Position
I:complement(1817207..1818370)
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AA seq
387 aa
AA seq
DB search
MGEMILQIGNVEETPELVGYDSSRIEVLNNHLWRMIEDKRLIGASYCIAKDNKVIANNGL
GYRTYKREKDKPMLPDTIMRVASVTKLVTAVAIFKLVEDGFIRPDEQMSKYIPQMDKEPF
KVITIAQVLSHSSGLPFDSDEKNNPFAYIEKCKKGDDWIEAGLKAGVACKPKEQWIYSTF
GYLLLGALIQNVTGISAEEYITKNILEPLDMKDSTFIIGPELCDRHLIQFESHEEIMKEI
MKKGSVLDDDSIWSEVPKTGGGLHSTVIDLSKFARMLCNGGRFGNTRIMGKMTIEKMRTQ
YLFNVPNYCWGANEKNRLYGMGPDLRRGDAIITSPDFFFHEGWGYISVVVDPRENLSAVW
FVPYTDGDIWLPESLLNVKNIIWSGLI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatgattttacagattggtaatgttgaagaaacaccggagcttgtaggttat
gacagcagcagaatagaagtactaaataatcatctttggagaatgattgaagataagagg
cttataggagccagttattgtatagccaaagataataaggtgattgccaataatggacta
ggttataggacttataaaagagaaaaagataaacccatgctgcctgatactattatgcgg
gttgcctcagtaaccaaactggtaacggccgtagcaatctttaagctggttgaagacggc
tttatccgccctgatgaacagatgtcaaagtatattccccagatggataaagaacccttt
aaggtaattaccatagcacaggttttatcccactcctccggacttcctttcgattctgat
gaaaaaaacaatccttttgcatatatagaaaaatgtaagaagggtgatgactggatagaa
gccggactaaaagcaggagtagcctgtaaaccaaaagaacagtggatatattcaactttt
ggttatctgcttcttggagcccttattcaaaatgttacgggaataagtgcagaagagtat
attacaaagaatatattagaacctttagatatgaaggatagtacctttattataggccct
gagctttgtgacaggcatttaattcaatttgagagccatgaagaaataatgaaggaaata
atgaaaaagggatcagttctagatgatgatagtatctggagtgaggttccaaaaaccggc
ggagggctccattctacggttattgatttatccaaatttgcaagaatgctttgtaatgga
gggcgttttggcaatacccggataatgggtaaaatgaccattgaaaaaatgagaacccag
tatctttttaatgtacccaattactgctggggagccaatgagaaaaatcgtttatacggt
atgggtcctgatcttagaagaggagatgccattattacaagccctgatttcttcttccat
gaaggctggggatacataagtgttgtagttgatcctagggagaacttaagtgcagtctgg
tttgtaccttatacagatggggacatatggcttccggaaagtcttcttaatgtaaagaac
attatatggtcaggattaatttaa
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