Herbinix luporum: SD1D_1899
Help
Entry
SD1D_1899 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsd03400
]
SD1D_1899
DNA repair and recombination proteins [BR:
hsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD1D_1899
Archaeal homologous recombinant proteins
SD1D_1899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_ATPase
AAA_27
REST_helical
AAA_22
AAA_16
ABC_tran
GTP_EFTU
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CUH93439
UniProt:
A0A0K8J7K4
LinkDB
All DBs
Position
I:complement(2040404..2043559)
Genome browser
AA seq
1051 aa
AA seq
DB search
MKPIYIKMSAFGSYAGEEIIDFTDINSGIFLITGDTGAGKTTIFDAITYALYDQTSGGKR
DGAMMRSQYANDDVPTYVEFKFLYRGKTYIINRSPRQNRRSKRRNKEGEYTITTDQPRVS
LIMPDGQIYKGNIRETNQKIIEIIGLDVNQFTQIAMIAQGDFLKLLHASSKERKEIFGKI
FNTKIYWLIEEELKRRASAISATLEDNKKAINRELENVQCIKDSRLTEKWQDMKQFMESD
SDKQLELIELIISEAKERENEINNSIQKNQEELEKINSKLMQAKDINNLFEALELAHKKK
EELDLRKDQMDLVWQQIDRGKKALQVEPKEASYLNKQRELSECSKRIEDLKAWLEKNEAK
LAMLKKEKEDKEKEYKKKSPILASKISNINELLPKYEQLDKMTSEIKSLKEIKAITEEKY
DKADKNVNKTKENKENLIKEQEELKSLADRYTHLELTVKNLDEKINSLKSLINLIKQMKS
LLANYNQGEKDYKAADEDYDLKCKHYENLYHNFIEGQAGILATSLEEGSPCPVCGSTSHP
NKAVATDLLIDESKLREAKKQMDEAAKLRQAKNEVLQKAEQEYKVKRNLVEHEGKRIVAA
SFNPDQVNIESLQTMLAKEEEKLQALTTEKNQAKAAGDKYTAYQTQLKDLEAALESYNKE
KEEANKALGEVAVSLTKTETITNSLKEALVYENKSHALNELAAAKEQMEKLDKAKAKIAD
EYQAMVEVASNKKGNLKAEEKSFIRLTEEVRSFKEAFYNELEKQGFSSVEDYHKSLISSQ
KIEELSQSYQSYRDEIIENDTNLKNYTMQTQGKSRIETKDLENRKSQLTKVKTELEDDGK
YVYGIIKRNQEIYDKLTKLIADRKKTKNTYGTISRLSDTANGKLSKRHINFQTYIQRRYF
NMILAEANKRLYTMSNNQFILKCRDMEDLSGQGEVGLDLDVYSMVNDQVRDVKTLSGGES
FMAALSMALGMSDIIQNTAGRIHIDTMFIDEGFGSLSENTRMQAIKILNDLSGGKRLVGI
ISHVTELKAQIETKLLVTKGEKGSRARWEIS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatttatattaaaatgtctgcctttggctcctatgcaggggaggaaataatt
gattttactgatataaatagtggtatttttcttataaccggagataccggtgcaggaaaa
accacaatatttgatgccattacctatgcactttatgaccagaccagcgggggaaagcgt
gatggcgccatgatgcgtagccaatatgcaaatgatgatgtgccgacctatgtagaattc
aaatttttgtatcgaggcaagacttatataataaatagaagtccaagacaaaaccgtaga
agtaagagaaggaataaagagggagagtatactataactactgaccagccaagggttagc
cttattatgccggatggtcagatatacaagggaaatatcagagaaaccaatcaaaaaatt
atagagattataggccttgatgtaaatcaatttacccagatagccatgattgcccaaggg
gattttctgaagctacttcatgcctcttctaaagaaagaaaagagatattcggcaaaata
tttaatacaaaaatatattggctcatagaagaggaactaaaaagaagggcaagtgccata
tctgctacccttgaagataacaaaaaagctataaacagagaactggaaaatgtacaatgt
attaaagacagtagattaacagaaaaatggcaggatatgaagcagtttatggaaagcgat
tctgataagcagctggaactaatagaacttataatctcagaagcaaaagaaagagaaaat
gaaatcaacaattctatccaaaaaaatcaggaagaattagaaaagattaattcgaaactt
atgcaggctaaggatatcaataatctatttgaggctttggaattagcccataaaaagaaa
gaagaactggatttacgaaaagaccagatggaccttgtttggcagcagatagatagggga
aaaaaagcattgcaggtggagccaaaagaagcttcttaccttaataagcaaagggaatta
tcagaatgcagtaaaagaatagaagatcttaaggcctggctagagaaaaatgaagcaaaa
ttggcaatgttaaagaaggagaaggaggataaggaaaaggagtataagaaaaagagtcct
atactagcctcaaagattagtaatattaatgaactcctgcccaaatatgagcagcttgat
aaaatgacatctgaaataaaaagtcttaaagagattaaagctataacagaagaaaagtat
gacaaagctgataagaatgttaataagactaaggaaaataaggagaatttgattaaagaa
caggaagaactaaaaagccttgcagaccggtatacacatttagaacttactgtaaagaat
ttagacgaaaaaataaattctctcaaatctttaattaatctaataaagcaaatgaaatct
ctactggctaattataatcagggggagaaggattataaggctgctgatgaagactatgat
ttaaaatgcaaacattatgaaaatttatatcataatttcattgagggacaagcgggaata
cttgccacaagtttagaggaaggctctccctgcccagtatgtggctccacatctcatcct
aataaggcagtagctacagacctattaatagatgaaagtaagttaagggaagcaaaaaag
cagatggatgaagctgctaaacttaggcaggctaaaaatgaagtattacaaaaagccgaa
caagaatataaagtaaaacgaaatttagttgaacatgagggaaagaggattgtagctgct
tcatttaatcctgaccaagtaaatatagagtcactgcaaactatgcttgctaaggaagaa
gaaaagttgcaagctttaacaactgaaaaaaatcaggctaaagcagcaggggataagtat
acagcttaccaaactcagctaaaggatttagaagctgctttggaatcatataataaagaa
aaggaagaagcaaataaagccctaggggaagtggcagtcagtcttactaagacagaaact
attactaattcccttaaggaagccttggtatatgaaaataaaagtcatgcactaaatgaa
cttgctgcagcaaaagagcagatggaaaagttggataaggctaaagctaagatagcagat
gaatatcaggccatggtagaagtcgcttccaataagaaggggaatcttaaagcagaagaa
aaaagctttataagacttactgaagaagtcagaagctttaaggaggcattttacaatgag
ctggaaaagcaaggattttcaagtgttgaagattatcacaaatcattaattagttcccaa
aagattgaagagttaagccaaagctatcaatcatatagagacgaaataattgaaaatgat
accaatcttaagaattatactatgcagacacagggtaaaagccggatagaaaccaaagac
ttggagaataggaaatcccaactgactaaagtaaaaactgaattagaagatgatggcaaa
tatgtatatgggattataaaaagaaatcaagagatatacgataaacttactaagcttata
gccgatagaaagaaaactaaaaatacctatggaactatcagtaggctgtccgatacggcc
aacggcaagttaagcaaacgtcatattaattttcagacttatatccaaagaaggtatttt
aatatgatacttgctgaggcaaataagcgattatacactatgtccaataatcaatttatc
ttaaaatgccgggatatggaagacttatcgggacagggagaagtgggccttgatcttgat
gtatacagtatggtaaatgaccaggttcgtgatgttaagaccctatccggtggtgaatca
tttatggcggctttatccatggctttaggaatgtcagatattattcagaatacggcagga
agaatacatattgataccatgtttattgatgaaggctttggctccttaagtgaaaacacc
cgtatgcaggctataaaaattttaaatgatttatccggaggcaagagattggtaggaatc
atatcccatgtaactgagttaaaggcacagatagaaaccaagctgcttgtaacaaaagga
gaaaagggcagcagggccagatgggaaatatcttaa
DBGET
integrated database retrieval system
