Herbinix luporum: SD1D_1927
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Entry
SD1D_1927 CDS
T04072
Symbol
valS
Name
(GenBank) Valine-tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hsd
Herbinix luporum
Pathway
hsd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SD1D_1927 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsd01007
]
SD1D_1927 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsd03016
]
SD1D_1927 (valS)
Enzymes [BR:
hsd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SD1D_1927 (valS)
Amino acid related enzymes [BR:
hsd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SD1D_1927 (valS)
Transfer RNA biogenesis [BR:
hsd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SD1D_1927 (valS)
Prokaryotic type
SD1D_1927 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
RUBY_RBDX
zf-C2HC5
DUF7129
Zn_ribbon_8
DUF7130
ACBP4_C
DZR
Snapin_Pallidin
Zn_ribbon_PF0610
HypA
DUF1664
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
CUH93465
UniProt:
A0A0K8J7F9
LinkDB
All DBs
Position
I:complement(2070708..2073368)
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AA seq
886 aa
AA seq
DB search
MKKELAKTYNPKDIEGKLYQKWLDKKYFRATVDRSKKPFTIVIPPPNITGQLHMGHALDN
TLQDILIRFKRMQGYNALWQPGTDHASIATEVKIIEQLKEEGIEKQDLGREGFLERAWQW
KEEYGGRIISQLKKLGSSCDWDRERFTMDDGCNHAVNKVFVKLYNEGYIYKGSKIINWCP
VCHTSISDAEVEHEEREGHFWHIKYPIAGEDGYVEIATTRPETMLGDTAVAVHPDDERYQ
HLIGKNVILPIVNKEIPVIADTYVDKEFGTGVVKITPAHDPNDFEVGLRHKLPEINIMND
DASINENGGKFAGMDRYEARKAIVKELQDLGLLIKVENHIHNVGTHDRCNTTVEPLIKPQ
WFVKMDELIKPAIEAVKSGEIEIIPERFEKIYFNWTNNIRDWCISRQLWWGHRIPAYYCD
GCGEIIVSEEEPSRCPKCESSNLRQDEDTLDTWFSSALWPFSTLGWPDNTEDLDYFYPTD
VLVTGYDIIFFWVIRMVFSGYAHMGKKPFSKVLIHGLVRDSQGRKMSKSLGNGIDPLEVI
DKYGADALRFTLITGNAPGNDMRFYWERVEASRNFANKVWNASRFIMMNLEKADLSTTID
EKLLTQAERWIISKANTLVKEVTDNLDTFEIGIAAQKIYDFIWEEFCDWYIEMVKPRLYN
DEDDTKLSALWTLQHVLTTSLKLLHPYMPFVTEEIFCTLQEMTGLKEGESIMISSWPVYN
PDWEFIRDTESIELIKEAVKGIRNVRSQMNVPPSRKAKVVVVSDNERIREIFTESKVFFA
TLGSASEVIVDKDKTGVSDDAVSTVIQGAVIYIPFEDLVDIDKEIERLNKEKDRLEKELK
RVNGMLANPNFISKAPESKIAEERAKLDKYTDMMNQVLDRLKSLNR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaactggcaaaaacctataatcccaaggacattgaaggcaaattatatcag
aaatggctggataaaaaatattttcgtgctactgttgataggagtaaaaaaccttttaca
atagtaataccacccccaaatattacagggcagctgcatatgggtcatgccttggacaat
accttgcaagatattcttataaggtttaagagaatgcaaggatataatgccctgtggcaa
ccaggcacggatcatgccagtatagccacagaagttaagattattgaacagctaaaagaa
gaaggtatagaaaagcaggaccttggcagagaaggtttccttgaaagagcatggcaatgg
aaagaagaatatggtggcaggattatatcccagttaaagaagcttggttcttcatgtgat
tgggatagagagagattcaccatggatgatggatgtaaccatgcggtaaataaggtattt
gtgaagctttataatgaaggttatatctataaaggctcaaaaataatcaactggtgtccc
gtatgtcatacatctatatcagatgcggaagttgaacatgaggagagggaaggacatttt
tggcatattaaatatcccattgcaggagaagatggttatgtagaaatagccaccacaaga
ccggagaccatgctgggagatactgccgtagcagttcatccggatgatgaaagatatcaa
catttaatcggaaaaaatgttattcttcctattgttaacaaagagataccggtgattgcc
gatacctatgttgataaagagttcggaaccggtgtagttaagattacccctgcccatgac
cctaatgactttgaagtgggactacggcataagcttcccgaaatcaatattatgaatgat
gatgcaagcattaatgaaaatggcggtaagtttgccggtatggatcgttatgaagccaga
aaggctatagtaaaagaattgcaggatttaggcctattaataaaagtagaaaaccatatc
cacaatgtaggtacccatgatcgttgtaatacaactgtagaacctctaattaagccccag
tggttcgttaagatggatgagttaattaagccagctatagaagctgtaaaatccggtgag
attgaaattattcctgaacgttttgaaaaaatatattttaattggaccaataacatcagg
gactggtgtatatcaagacaattatggtggggacatagaataccggcttattattgtgac
ggctgcggagaaataatagtatccgaagaagaaccttctaggtgccccaaatgtgaaagc
agtaatctaagacaggatgaggatactttagatacctggttctcatctgccttatggcct
ttttctaccttaggctggcctgataatacagaggatttagattacttttatcctacagat
gtattagtaaccggttatgatattatcttcttttgggttatccgtatggtgttttcagga
tatgcccatatggggaaaaaaccttttagcaaggtattaatccatggtttggtaagggat
tctcaaggtcgtaaaatgagtaagtccctgggtaatggtattgatccccttgaagtgatt
gataaatatggagccgatgctcttcgttttactcttattacaggtaatgctcccggtaac
gatatgcgcttttattgggaaagagttgaggccagcagaaattttgccaataaggtatgg
aatgcttcccgctttattatgatgaatctagagaaagcagatttatcgacaactattgat
gagaagctcctaacacaggcagaacgctggataatatccaaggcaaataccttagttaag
gaagttacagataatctagatacctttgaaattggtattgctgcacagaaaatttatgat
tttatctgggaggaattctgtgactggtatatagaaatggttaagcccagattatataat
gatgaagatgatacaaagctgtctgcactttggacattgcagcatgtactgactacatcc
ttaaaacttcttcatccatatatgccttttgtaacagaagaaatcttctgtacccttcaa
gaaatgacagggctaaaagaaggtgaatccattatgatatcttcctggcctgtttataat
cctgactgggaatttattagggatacagagagtatagaactgataaaagaagcagtaaaa
ggtatccgtaatgtaaggtcccaaatgaatgttcccccaagcaggaaggctaaggttgtt
gttgtttctgataatgaacgtatcagagagatttttactgagagtaaagtattctttgcc
accttaggctctgccagtgaggttatagttgataaagataagacaggagtaagtgatgat
gcagtatcaacagttatccaaggggctgtaatatatattccatttgaggatttagtagat
attgataaggagattgaacgtctaaataaagaaaaggaccgtctagagaaggaattaaag
cgggtaaacggaatgcttgcaaatcccaactttatatctaaagctccggaaagtaagatt
gcagaagaaagggctaaactagacaaatatacagatatgatgaatcaggttttagataga
ctaaagagcctgaatagataa
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