Herbinix luporum: SD1D_1934
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Entry
SD1D_1934 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_1934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_1934
Transporters [BR:
hsd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SD1D_1934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
RsgA_GTPase
DUF87
AAA_23
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CUH93472
UniProt:
A0A0K8J830
LinkDB
All DBs
Position
I:2082295..2084511
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AA seq
738 aa
AA seq
DB search
MLTILRNLKKSALAILFVIILLLIQAFCDLSLPSYTSNIVNIGILQAGIESSVPEVIRAS
QLEKSLLFLNQNDKDKLLSHYSLINKENLNQDEWATYLKKYPLLDDEDLYIWDGEDETLI
SSLIADPLLIISTLELNPSKANMFHDINTKDGDIYTILNNLPEEAREEMLKPIKEQIKLM
PDTLKSQATVAYVRAEYEAIGINIGKLQTRYILTVGAKMLGLAFAAMAASILVTFVAARI
AAKLGRDLRNDVFCKVLSFSNAQMDRFSTASLITRSTNDIQQIQMMVVMMVRIVIYSPIL
ALGGIIRILNTNTTMTWTLGVGVGAVLSLVIILMVVALPKFKLMQKLVDKVNLVMREILC
GLPVIRAFSNENHEKERFDKVNTALTKNSLFVGRVMTFMMPALMLIMNLVAILIVWVGAD
RINTGTMQVGDIMAFIQYTMQIIMSFLMMTMISIILPRAAISVGRINEVLKEEPTIHDPA
EEETIDPNKNGLLEFRNVSFSYPNAEEDVLSDISFIAKPGEVTAIIGSTGSGKSTLVNLI
PRFYDVTEGEILINGTDIRNISQYNLRKRLGYVPQKGVLFSGTIESNISFGMSEASTETI
KKAARIAQAAEFIEEKPEGYKEPIAQGGSNVSGGQKQRLSIARAIAKNPEIYIFDDSFSA
LDYKTDSELRKALKKELSHSTVIIVAQRISTIVNADQILVLDNGKIVGKGTHKELLKDCE
VYRQIASSQLSKEELAYE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccatattaagaaatctaaaaaaatcagcccttgcaatcctctttgttattatt
ctcttactaattcaagccttttgtgacttatcattaccatcctatacctccaatattgta
aatattggtatcttgcaggccggtatagaaagctcagtccctgaggtaataagagctagc
cagttggaaaaatctctattatttttgaatcagaatgacaaagacaagcttctatcccat
tatagtctgattaataaagagaaccttaatcaagatgaatgggctacttatcttaaaaaa
tatcccttgttagatgatgaagacttatatatttgggatggtgaagatgagactttaata
agtagtttaattgccgaccccctacttattatatctactttagaacttaacccatctaaa
gcaaatatgtttcatgatattaacacaaaagatggggatatatacaccatattaaataat
ctccctgaagaagctagggaagaaatgctaaagccaataaaggaacaaattaaacttatg
cccgacaccttaaaatctcaagccacagtggcttatgttagggcagaatatgaagccatc
ggtataaatataggcaagttacagacccgttatattcttacagtaggagctaaaatgctt
ggacttgcctttgctgccatggctgcctccatcttagttacctttgtagctgctagaatt
gctgccaaacttggtcgtgatcttagaaatgatgtattttgtaaagttctttcattttca
aatgcccagatggatcgcttctctacagcctctttaattaccaggagcaccaatgatatt
cagcaaattcaaatgatggttgttatgatggtccgtattgtaatctactctcccatattg
gcacttgggggtattataagaatattaaataccaatacaaccatgacttggactttgggt
gtaggggtaggtgcagtactttccctggttataatacttatggttgtggcactaccaaaa
tttaaacttatgcaaaaactggtggataaagttaatcttgttatgagggagattctttgt
ggtctaccggttataagggcctttagtaatgaaaaccatgagaaagaacgatttgataag
gtcaacacagctcttactaaaaacagcctatttgttggccgtgtaatgacctttatgatg
cctgctcttatgcttattatgaatttagttgcaatccttattgtatgggtaggtgcagac
agaattaacacaggaaccatgcaggtgggagatattatggcatttatccaatataccatg
cagattattatgtcctttttaatgatgaccatgatttctataatccttccgagagcggcc
atatctgtaggccgaattaatgaagttcttaaagaagaacccacaattcatgatcctgca
gaggaagaaactatagatcctaacaaaaatggacttcttgaatttagaaatgtatcattt
agttatcccaatgccgaagaagatgtactgtcagacatcagctttattgcaaagccaggt
gaggttactgcaatcataggcagtactggtagcggtaaaagtacattagtaaatcttatt
cccagattctacgatgtaacagaaggtgaaatactaattaatgggacagatatccgcaat
atctcccagtataaccttagaaaacgtttaggctatgttccccaaaagggcgtattattt
tcaggaactattgaatcaaatattagctttggcatgtcagaagcctccactgaaactata
aaaaaagctgcaagaattgcccaagcggcagaatttatagaagaaaagcctgaaggatat
aaggagcccattgcccagggaggtagcaatgtctccggtgggcagaagcagagattatct
atagccagggctatcgcaaaaaatcccgaaatttatatttttgacgatagtttctcagcc
ctagattataaaaccgatagtgaacttcgaaaggctttaaaaaaggaattgtcccacagt
acagttattatagttgcccaaagaataagcacaatagttaatgcagatcaaatcctagta
ctggacaacggaaaaattgtcggtaaaggaacccataaagaattactaaaagattgtgaa
gtttatcgtcagatagcatcttcccagttgtcaaaggaggagttggcttatgaataa
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