Herbinix luporum: SD1D_1935
Help
Entry
SD1D_1935 CDS
T04072
Name
(GenBank) putative membrane protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_1935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_1935
Transporters [BR:
hsd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SD1D_1935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_membrane_2
AAA_21
AAA
AAA_22
SMC_N
AAA_23
nSTAND3
DEAD
AAA_18
DUF87
AAA_14
AAA_30
AAA_28
TsaE
DO-GTPase2
AAA_15
AAA_5
AAA_29
Rad17
AAA_33
AAA_16
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CUH93473
UniProt:
A0A0K8J807
LinkDB
All DBs
Position
I:2084504..2086342
Genome browser
AA seq
612 aa
AA seq
DB search
MNKNDKKPKMGGPRHGMGAPVEKAKDFKGTMKKLLAYLAGYKWALLIVFLFAIGSTIFSI
IGPTILGDAITEIVNGFIDKISGGKGINFNALGKILLLLIGLYGISSLFSFIQGWITTEI
AQRVSYKFRKSISEKIHRMPMGYFDSMTHGEILSRVTNDVDTLSQSLNQSLTQLITSVVS
IVGIFIMMIRISVPMTLLALLTIPISLGIMGAVVKKSQKHFQKQQEYLGHVNGLVEEVYG
GHNIVKAFNKEEDFIKDFGKKNETLYESAWKSQFLSGLMHPIMQFVGNLGYVGVAILGGY
LTINGRIQIGQIQTFFQYIRNFTHPITQLAQVANMFQSTAAASERVFEFLEAAEEVADTD
TPLSIEGLKGNIEFKHVNFGYNSDKTIIHDFNAKIYDGQKVAIVGPTGAGKTTIVKLLMR
FYDINSGDILIDGHNIKDFERSQLRRMFGMVLQDTWLYNGTIMDNIRYSKLDATDEEVIK
AAKAAHVHHFIMTLPDGYNMVLNEESTNISQGQKQLLTIARAILADPKILILDEATSSVD
TRTEILIQKAMDNLMKGRTSFIIAHRLSTIRDADIILVMKDGDIIEQGNHEELLAKGGFY
AKLYNSQFEQIA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgataaaaaacctaaaatgggtggcccccgtcatggtatgggagctcct
gtggaaaaagctaaggattttaagggaaccatgaaaaagctcttagcatatctagccggc
tataaatgggcattgttaatagtctttttatttgccatcggcagcaccatattttccatc
ataggacctacaatcctaggtgatgcaattactgaaatcgtaaatggctttatagataaa
atcagtggtggaaaaggaattaactttaatgccttaggaaaaatactacttctactaata
ggcctttatggtatttcctccttgttttcatttattcaaggatggattacaactgaaata
gctcaaagggtatcttataaatttagaaagagtatttctgaaaaaatccatcgtatgcct
atgggatattttgattctatgactcacggtgaaatactttctagggtaactaatgatgta
gataccttaagccaaagcttaaatcagagtcttacccagctgataacttcagtagtaagc
attgtaggtatctttataatgatgattagaataagtgtccccatgactctccttgcactg
cttacaatccccatatccttgggaattatgggagcagttgttaagaaatctcagaagcat
ttccaaaagcagcaagaatatttaggtcatgttaacggtttagtggaagaggtatatggg
ggtcacaatatagttaaggcttttaataaggaagaagactttataaaagattttggcaag
aagaatgaaaccctttatgaatctgcctggaagtctcagtttttatcgggacttatgcac
cctattatgcagtttgtaggtaatctaggttatgtaggtgttgccattcttggtggttat
cttacaataaacggacggatacaaataggtcaaattcaaactttcttccaatatataaga
aattttactcatccgattactcaactggcacaggtggccaatatgttccagtcaacggca
gcagcctcagaaagggtatttgaatttttagaagctgctgaggaagtagctgatactgat
actcctctttccatagaaggtcttaagggcaatattgaatttaagcatgtaaacttcgga
tataacagtgacaaaactatcatacatgactttaatgcaaaaatatatgatggtcaaaaa
gtagccatcgtaggtcctaccggagcaggaaaaactacaatagttaaactacttatgcgt
ttctatgatattaatagcggtgatatacttattgacggccataatattaaagattttgaa
agaagtcagttaagacgaatgttcggtatggttttacaggatacttggctttataacggt
actataatggataatatcagatacagcaaacttgatgctacagatgaagaggtaataaaa
gctgctaaggctgcccatgttcatcattttattatgactttaccggatggatataatatg
gtccttaacgaagaaagtacaaatatatcccaggggcaaaaacagctacttacaattgcc
agagccatcttagcagatccaaaaatcttgattttagatgaagccaccagctccgttgat
accagaacagaaatcctaattcaaaaggccatggataacctaatgaaaggaagaaccagc
tttatcatagcccatagattatcaaccataagggatgctgatataattcttgttatgaaa
gacggagatattatagaacagggtaatcatgaggaactgcttgccaaaggcggtttctat
gctaaactttataactcacaatttgaacaaattgcttaa
DBGET
integrated database retrieval system
