Herbinix luporum: SD1D_1993
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Entry
SD1D_1993 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hsd
Herbinix luporum
Pathway
hsd00550
Peptidoglycan biosynthesis
hsd01100
Metabolic pathways
hsd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD1D_1993
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD1D_1993
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsd01003
]
SD1D_1993
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
SD1D_1993
Enzymes [BR:
hsd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SD1D_1993
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD1D_1993
Glycosyltransferases [BR:
hsd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SD1D_1993
Peptidoglycan biosynthesis and degradation proteins [BR:
hsd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SD1D_1993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
WHD_RGF3
TMEM70
Motif
Other DBs
NCBI-ProteinID:
CUH93529
UniProt:
A0A0K8J7W4
LinkDB
All DBs
Position
I:2150198..2153002
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AA seq
934 aa
AA seq
DB search
MDYSKKGIENKQSYIKSTSRRLTSKFRVTLFRVCLIMAVVTVIICVYAGLGYIKGLIDSA
PNITQIDVMPKGYTTKVYDSDGNVIEHLIGAHANREYVKISDIPKVVQDAFVSIEDERFY
EHDGIDVRGIFRAFFSGIKGGEFSQGASTITQQLLKNQIFGGGSEKNFIDKLERKIQEQY
LAIQLENKLDKDLILEYYLNTINLGAGTYGVQTASKRYFNKNVGELTLSEAAVIAAIAQL
PSYHNPITNPERNEVRKNEVLRQMLKQGKCSQEEYDEAMADDVYSRIQTVNEEYTTKSYY
SYFTDELIVQVMEDLQSELGYTQTQALDLIYSGGLRIITTQDSTIQRIVDEVVADESNYP
EMGKSLWELTYALSIQKNDEDKTTIHYHSDDLLKYFKDYPDPDNLYVDTKDSKFSLLFTD
KEDMQNKINEFKEAMMDEGDIILGEKIDMVIQPQVSFVVMDQHTGHVLAIVGGRGEKTGN
RTLNRATDTKRQPGSTFKILSTYLPALDSAGFTLASVIDDAGPYYYPGTNTEVSNWRSKK
EYEGLSTIRKAIYDSMNIVTVKTLVEVTPNVGYDYLKKLGFTTLVESRTEPDGRVVSDIN
YPMALGGLTDGVTNLELTAAFAAIANKGLYIEPIFYTKILDHNGKVLLENEPEKEQVIKE
STAWLLTNAMEDVVTIGTGKQLKLQAIDMPVAGKTGSTSDYNDLWFSGYTPYYTASVWGG
FDHNRAQSERTYTRTIWRTIMERIHIEKGLEKKDFTMPDTIVSAKICTKSGKLAVEGLCD
HYLGGNTVRVEYFAKGSEPRVKCDVHVKAHICTETNKLATEFCPNQKEAVYLNKTETGVT
YDTPYILPKDKCTVHSHPGFNPPFDFNLPGNQNGNQNGNPNNGEENPPDNQEPPDNPENG
NENGNQNGNVEDPNNSDGQNQNEDSNNFWSWFNP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggattatagtaaaaaaggaattgaaaacaaacaaagctatataaaatcaacttccaga
cggcttacttcaaaatttcgcgtaactttatttagagtatgcctcattatggcagttgta
acagtcattatctgtgtatatgcaggtcttggctatataaaaggacttatagacagtgct
cctaacattacccagattgatgttatgcctaagggatatacgaccaaggtatatgatagt
gatggtaatgttatagaacatttgattggtgcccatgcaaatcgtgagtatgtaaaaatc
agtgatataccaaaagtagttcaggacgcatttgtcagcattgaggatgaacgtttctat
gagcatgacggaatcgatgtacgaggtatatttcgtgccttcttttccggtataaaaggc
ggagaatttagccaaggggccagtacaataacacaacagttattaaaaaaccaaatattt
ggtggcggtagtgaaaaaaactttatagacaagctagaacgtaaaattcaagagcaatac
cttgctatccaattagaaaataaattagacaaggatttgattcttgaatactacttaaat
accattaatcttggagccggtacctatggggttcagacagcgtctaaaagatactttaac
aagaacgttggagaactcaccctatcagaagctgctgttatagcagctattgcacagctt
ccttcttatcacaatcctataactaatccggaaaggaacgaagttagaaagaatgaagtt
ctaagacagatgcttaaacagggtaagtgtagtcaggaagaatacgatgaagctatggct
gatgatgtttattccagaattcagacagttaatgaggagtataccaccaaatcctattac
agttatttcaccgatgaattaatcgtacaggtaatggaagatttacaatcagaacttggt
tatactcaaactcaagccttagacttaatatacagtggtggattaaggattattactaca
caagattccacaatacagcgtattgtagatgaagtagtagcggatgaatctaactacccc
gaaatgggaaaatcattatgggaattaacatatgccttatccatacaaaaaaatgatgaa
gataaaaccactattcattatcacagtgatgaccttttgaaatattttaaagattatcct
gatcccgataatctttatgtcgatacaaaagatagtaaattctccttattgttcacagac
aaagaggatatgcaaaataaaattaatgaatttaaggaagccatgatggatgaaggggat
ataattctaggggagaaaattgatatggttatacaacctcaagtctccttcgtggtgatg
gatcagcataccggacatgttctggccatcgtcggtggcaggggtgaaaaaaccggtaat
cgtaccctaaacagagctacagatacaaaaagacagccgggttcaacatttaagattcta
tccacttatcttcctgctttggattctgccggctttactcttgccagtgtcatagatgat
gcggggccttattactaccccggaaccaatactgaagtaagcaactggagatccaaaaag
gaatatgaaggtttatctactatacgaaaagctatttatgattctatgaatattgtaacc
gtaaagaccttggttgaagtaactcccaatgtaggctatgactatttgaaaaagcttggt
tttactaccttggtagaatcaagaacagagcctgatggtagagttgtatcagatattaac
tatcctatggcattaggaggtctaactgacggtgtaaccaacctagaacttacagcagcc
tttgctgccatagccaataaaggactttatatagaacctattttctatacaaaaatttta
gaccacaatggcaaggtcttacttgaaaatgagcctgaaaaagaacaagttatcaaagaa
tccaccgcatggttacttacaaatgcaatggaagatgtagtaactatcggaaccggtaag
caattaaaacttcaagcaattgatatgcctgttgcaggtaaaacaggatcaacttcagat
tataacgatttatggttttcaggctatactccttattatacagcttctgtatggggaggt
tttgatcacaatagagctcagtcagaacgtacctatactcgtacaatttggcgtactatt
atggaaagaattcatattgaaaaaggtctggagaaaaaagactttaccatgcccgataca
atagtttctgcaaagatatgtactaagtcaggtaaattagctgtagagggattatgtgat
cattatttaggaggtaatactgtaagagttgagtattttgccaagggatccgagcctagg
gtaaaatgtgacgtccatgtaaaagcacacatatgcacggaaacaaataaattggctact
gaattttgtcctaaccagaaagaggcagtatatcttaacaagacagaaaccggtgtaacc
tatgataccccttatatactacctaaggacaaatgtacagtccatagtcaccctggattt
aatcctccttttgatttcaatttacccggtaatcaaaatggaaatcaaaacggcaatcct
aataatggagaagaaaatcccccagataaccaggaaccaccggataatccggaaaatgga
aacgaaaacggaaaccaaaatggaaatgtagaagatcccaataattccgatgggcaaaat
caaaatgaagattcaaataacttttggagttggtttaatccataa
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