Herbinix luporum: SD1D_2025
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Entry
SD1D_2025 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
hsd
Herbinix luporum
Pathway
hsd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD1D_2025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsd03032
]
SD1D_2025
Enzymes [BR:
hsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
SD1D_2025
DNA replication proteins [BR:
hsd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SD1D_2025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_2
Toprim_4
Toprim
Toprim_3
DnaB_bind
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
CUH93561
UniProt:
A0A0K8J7C3
LinkDB
All DBs
Position
I:complement(2188953..2190734)
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AA seq
593 aa
AA seq
DB search
MYYPDEIIEEVRIRNDIIGVIGSYINLKKSGNNYLGLCPFHNEKTPSFSVSQSKQMYHCF
GCGVGGNVYTFIMEYENYTFVEALKYLAERAGVNLPEQEYSASQKRRMDIKNRLLEINKE
AAKYYYYQLKSNRGQAARQYLLDRGLSEETIKSFGLGYANRYSDDLYKYLKSLQYEDNIL
KQSGLVSFDEVRGGHDKFWDRIIFPIMDANNKVVGFGGRVMGDGMPKYLNSPETDIFDKS
RILYGLNIARRSRESYYLICEGYMDVIALHQAGFTNAVAALGTAFTEYHANLLKRYTREV
VLTFDSDEAGTQAALRAIPILRNAGLTVKVVNMDPFKDPDDFIKSLGPNEYKKRIEEAKN
SFFFEVDILESSYNLEDPEEKTKFFNELAKKLLNFSEELERNFYLEALAKTYQIDAMLLY
RLVNKLGSQSVLQGSYNKKQTYSQPKQRKTSDGGIDKAQKLLITWLAEDAAIYDKLKGFI
KPEDFSDGIYSEVAKLIFEEYDKGGKVIPAKIISCFEDSSQQSQVAAILNAGLLGEIKET
ERQKALFDTVYLLKEESLDKQSLKAIETNDTILLQNIIMEKADLKKNIAAILK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtattatccggatgaaataatagaagaagtccgaataaggaacgatattattggtgta
ataggctcctacataaatttaaagaagtcaggtaataactatttgggattatgtcctttc
cataatgaaaagaccccatcttttagtgtcagtcaatctaaacagatgtatcactgcttt
ggttgcggggtcggaggcaatgtttatacctttattatggaatacgagaattatacattt
gtagaggcattaaaatatttggcagaaagggcaggggttaatctgcccgagcaggagtat
tctgcaagtcaaaaacgcaggatggatataaaaaacagactcttagaaataaataaagaa
gctgccaagtattattattatcaattaaaatccaatagaggacaagctgccagacagtat
ctgcttgatcgaggcttaagtgaggagaccataaagtcatttggtctaggttatgctaat
cgctatagtgatgatctttataaatatttaaagagcctacagtatgaggataatattctc
aaacaatcgggcctggtatcatttgatgaggtacggggtggtcatgataagttctgggat
aggattatatttcctattatggatgccaataataaggtagttggtttcggtggacgagtt
atgggggatggtatgcccaaatatcttaattcaccggagacagatatatttgacaaaagc
aggattttgtatggattaaatatagccagaagatcaagggaatcttattaccttatttgt
gaaggctatatggatgttatagctttacatcaggcgggatttactaatgctgttgctgct
cttggtacggcatttacagaatatcatgctaatttattaaaacgatatacaagggaagtt
gttttaacctttgatagtgatgaagcagggacccaggcagcacttcgggctataccgatt
ttaaggaatgcaggcttaactgttaaagtggtcaatatggatccctttaaggatcccgat
gattttattaagtctttaggacctaatgaatacaagaaaaggattgaagaagccaagaat
agctttttctttgaagttgatatacttgaaagtagctataatttagaggatccggaggag
aaaaccaagttctttaatgagctggcaaaaaaactcttgaatttttctgaggaattggaa
aggaatttctatctggaggctctggcaaagacttatcaaattgatgctatgttattgtat
agacttgtaaataagctgggctctcaatctgttttacaaggctcttataataagaagcag
acttattcacagcctaagcaaagaaaaaccagtgacggcggaatagataaggctcagaaa
cttttaattacatggcttgcggaagatgccgccatctatgataagttaaagggctttatt
aagccggaggatttttcagatggtatttattcagaagtagctaaattaatttttgaagaa
tatgacaagggcggtaaggttataccggctaaaattatcagttgttttgaggattcttca
caacagtcacaggtggcggctattttaaacgccggtctactaggtgagattaaggagaca
gaaaggcagaaggcactgtttgatacggtatatcttctgaaggaagaaagtttagacaag
cagagtctaaaagccatagaaacaaatgatactatattattgcaaaatatcatcatggag
aaagcagaccttaaaaagaatatagcagcaattctaaagtaa
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