Herbinix luporum: SD1D_2075
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Entry
SD1D_2075 CDS
T04072
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hsd
Herbinix luporum
Pathway
hsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD1D_2075 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsd03400
]
SD1D_2075 (uvrB)
DNA repair and recombination proteins [BR:
hsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD1D_2075 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD1D_2075 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
DUF2299
Kinesin
FlaG
Microtub_bd
SHCBP_N
AAA_5
GlutR_dimer
Motif
Other DBs
NCBI-ProteinID:
CUH93611
UniProt:
A0A0K8J7H4
LinkDB
All DBs
Position
I:complement(2249144..2251123)
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AA seq
659 aa
AA seq
DB search
MKFKLVSDFAPTGDQPEAISTLVEGFKSGNQCQTLLGVTGSGKTFTMANIIEQIQKPTLI
IAHNKTLAAQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAINDEIDKL
RHSATAALTERNDVIVVSSVSCIYGLGSPIDYQNMVLSLRPGMMKDRDDVLRRLIDIQYT
RNDMDFKRGTFRVRGDVVEIFPASSADMAFRVEFFGDEVDRILEIDVLTGEIKNSLEHMV
VFPASHYVVAPEQLEIAIQNIEGELEERVAYFKREGKLLEAQRISERTNFDIEMLRETGF
CSGVENYSRHLTGLEAGKPPHTLIDYFPEDFLIIIDESHMTIPQIRGMYAGDRSRKQTLV
DYGFRLPSALDNRPLNFEEFESKISQILFVSATPAEYEKQHELLRAEQVIRPTGLLDPEV
SLRPVEGQIDDLLGEIRKEIDKKNKVLITTLTKRMAEDLTNYLREVGIRVKYLHSDIDTL
ERSEIIRDMRMDLFDVLVGINLLREGLDIPEVGLVAILDADKEGFLRSETSLIQTIGRAA
RNAEGRVIMYADKETDSIRKAISETNRRRKIQHEYNIRHGITPTTIKKKVRDLISISKKV
EHNVKDMEKDLESMSKQELNKLVKDITKQMHTAAAELNFELAAELRDKMIEVKKHLMEL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaagctggtttctgattttgcccctacaggggatcaaccggaagccattagt
accttagtagaaggatttaaaagcggtaaccaatgtcagactttactgggtgtaacaggt
tctggtaagacctttacaatggctaatatcatagagcagatccagaagcctaccttaatt
atagcccataataagacacttgcagctcagctgtacggggagtttaaggagtttttccct
gagaatgcagttgagtattttgtcagttactatgattattatcagccggaagcatatgtt
ccttctactgatacctatattgagaaggattccgctatcaatgacgagattgataaattg
cgacattcggcaaccgctgccttgactgagagaaatgatgtcattgtagtatctagtgtg
tcctgtatctatggacttggtagccccattgattatcagaatatggttttgtctttgcgt
cccggtatgatgaaggatagggatgatgtacttagaagattgatagatattcaatataca
aggaatgacatggactttaaaagaggtacttttagggttcgaggagatgttgtggagatt
ttccctgcctcttctgcagatatggcttttcgtgttgaattttttggagatgaagtggat
aggattttggagatagatgtacttacaggtgagataaaaaatagcttggagcatatggtt
gtttttcctgcctcccactatgtggtagcacctgaacaactggagatagccatacagaat
attgagggggagttagaggaaagagtagcttatttcaaaagggaaggtaagcttttagaa
gcccaaagaatttccgaaagaaccaattttgatattgaaatgttaagggagacaggcttt
tgctccggagtagagaattattccagacatttaaccggacttgaggcgggcaagcctccc
cataccctgatagattattttccggaggattttctaattattatagacgagtcccatatg
actattccccagattaggggaatgtatgccggggacagatccaggaagcagaccctggtg
gattatggttttaggttgccttccgctttagataataggcctcttaattttgaggaattt
gaaagtaagattagtcagatactattcgtatcggctactcctgcagaatatgagaagcag
catgaattactaagggcagaacaggttatacgtcctacggggctattagatccggaggtt
tccctgcgtccggtggaaggtcagattgacgatttacttggtgagatacggaaggaaata
gacaagaaaaacaaagtgttgataacaaccttgaccaaaaggatggctgaggatttaact
aattatcttcgtgaagtaggcattcgggttaaatacctgcattcagatattgatacctta
gaacgttctgagattataagggatatgaggatggatttatttgatgtgcttgtgggtata
aatctgcttcgtgaaggtcttgatattcctgaggtgggattggtggctatcttagatgca
gataaggaaggattcttacgttctgaaacctccctaatacagactatcggtagggcggcc
cgtaatgcagaagggcgagttattatgtatgcagataaagaaacggattctattcgtaag
gccataagtgaaaccaaccgccgcagaaagattcaacatgaatataatataagacatgga
attacaccgactaccataaagaagaaggtacgtgacttaatcagcatatctaagaaggta
gaacataatgttaaagatatggagaaagatttagaatccatgtcaaaacaggaacttaac
aaattggttaaagatattactaaacagatgcatacagctgcagcagaacttaactttgag
ctggcagcagagcttcgtgacaagatgatagaagttaagaagcatttaatggagttataa
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integrated database retrieval system
