Herbinix luporum: SD1D_2211
Help
Entry
SD1D_2211 CDS
T04072
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
hsd
Herbinix luporum
Pathway
hsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SD1D_2211 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsd03021
]
SD1D_2211 (sigA)
Transcription machinery [BR:
hsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SD1D_2211 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
CUH93726
UniProt:
A0A0K8J7V9
LinkDB
All DBs
Position
I:2374638..2375765
Genome browser
AA seq
375 aa
AA seq
DB search
MNEQIVHNNFEKKFGELVKYAKKEQGIIEVERINTFIKDLKLDNKQVDKVFEKLETYNIV
VLDTPEDVNEQDEELLELDEPAEEISSQEDIYMTSTDNIVSDDPVHLYLKEIGNYPLLST
EEEIELAKRIEDGDETAKQLLAESNLRLVVSIAKRYVGRGLSFLDLIQEGNLGLIKAVEK
FDYTKGFKFSTYATWWIRQAITRSIADQSRTIRIPVHMSEIINKTYRTSRALLQDLGREP
TEEELSEALNMPVEKVREVLKISSDPISLDIPIGEEDDSHLGDFIKDENTLGPEEVATYS
SLKDQISKLLDTLTEREQKVLMLRFGLTDGRTRTLEEVGKEFHVTRERIRQIEAKALRKL
RHPSRSKHLKGFEIL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacagattgtccataataattttgaaaaaaaatttggagaactagttaaatat
gctaaaaaggaacaaggtattattgaagttgaaaggatcaatacttttattaaggattta
aaacttgataataagcaagttgataaggtttttgaaaaacttgagacttataacattgtt
gtattagacactccggaagatgttaatgaacaagatgaggaactactagaacttgatgag
ccagcagaagaaatatcctcccaagaagacatatacatgacatccactgacaatattgta
tcggatgatcctgttcatttatatttgaaagagattggcaactaccctttattaagtacc
gaagaagagattgaactggctaaacgtatagaagacggtgatgaaaccgccaaacaatta
cttgccgaatccaatcttcgtctggttgtaagcatagctaaacggtatgtaggaagaggc
ctatcatttctggatttaatacaggaaggaaatttaggcttaattaaagccgttgagaaa
ttcgattatacaaaaggttttaaatttagtacatatgccacttggtggattagacaagca
attaccagatccattgccgatcaaagccgtactatacgcattcctgttcatatgtcagag
ataataaataaaacctaccgtacatccagagccctccttcaagatctgggcagggagcct
acagaagaggaactttccgaagcattgaatatgcctgttgaaaaggttcgcgaagtttta
aaaatttcatctgatcctatttccctagacattcctatcggtgaagaggatgatagtcat
ctaggtgattttattaaagacgaaaataccttgggcccagaggaagtggccacctattct
agtcttaaagatcagatatcaaaacttcttgacactttaacagaaagggaacaaaaagtt
ctaatgcttcgctttggcttaacagacggtagaacaagaactttagaagaagtcggtaag
gagtttcatgttacccgagaaagaatccgacagattgaggcaaaggccctgagaaaactt
aggcatcccagccgttcaaaacatttaaagggcttcgaaatcctttga
DBGET
integrated database retrieval system
