Herbinix luporum: SD1D_2377
Help
Entry
SD1D_2377 CDS
T04072
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hsd
Herbinix luporum
Pathway
hsd00220
Arginine biosynthesis
hsd00240
Pyrimidine metabolism
hsd00250
Alanine, aspartate and glutamate metabolism
hsd01100
Metabolic pathways
hsd01110
Biosynthesis of secondary metabolites
hsd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SD1D_2377 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SD1D_2377 (carB)
00220 Arginine biosynthesis
SD1D_2377 (carB)
Enzymes [BR:
hsd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SD1D_2377 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
ATP-grasp_5
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_2
RimK
GapR_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
CUH93889
UniProt:
A0A0K8J8S2
LinkDB
All DBs
Position
I:complement(2561606..2564833)
Genome browser
AA seq
1075 aa
AA seq
DB search
MSKRTDIHKVLIIGSGPIVIGQACEFDYSGTQACKALKKLGYKVILVNSNPATIMTDTQT
ADVTYIEPLNVERLTYIIEKERPDALLPNLGGQSGLNLCSELDKAGVLKKYNVKVIGVQV
EAIERGEDRVEFKKTMDSLGIEMARSEVAYSVEEALAIAEKLSYPVVIRPAYTMGGAGGG
LVYNVDELKTVVSRGLQASMVGQVLVEESILGWDELELEIIRDAAGNMITVCFIENIDPL
GVHTGDSICCAPMLTIPKEVQMELQRQAYKIVDAIGVIGGTNVQFAYDPVSGRICVIEIN
PRTSRSSALASKATGFPIALVSAMLAAGLTLNEIPCGKYGTLDKYVPDGDHLVIKYARWA
FEKFKGAKDRLGTQMKAVGEVMSIGKTYKEAFLKAIRSLEIGRYGLGNINKFEEKNKEEL
LDMLHIPSSERQFIMYEALKKGASVEELYELTKIKPYFIRQMKELVEEEENLKKYQGQIP
PKEVLRQAKENGFSDKYLSQILMIDEDTIRKARKEANITAGWGSIHVSGTDNAKYFYSSY
HINEDKEATSSNKKVMILGGGPNRIGQGIEFDYCCVHAAFALRDMGIETIIVNCNPETVS
TDYDTSDRLYFEPLTVEDVLSIYEKEKPIGVIAQFGGQTPLNLAAQLKKNGVNILGTTPE
TIDLAEDRDRFREMMDKLNIPMPESGMATNLDEALQIAKRIGYPVMVRPSYVLGGRGMEI
VHDDESLKIYMEAAVGVTPDRPILIDRFLHNALECEADAISDGKQAFVPAVMEHIELAGI
HSGDSACVIPSLNIKKEHLDTIKEYTVKIANEMEVCGLMNMQYAIEDDKVYVLEANPRAS
RTVPLVSKVCDIQMVRLATEIMVASFLGGPSPVPALKEKKFTHYGVKEAVFPFNMFPEVD
PVLGPEMRSTGEVLGLAQSFGEAFYKAQEAGDHSLPLSGTVLISVNDRDKEELPEVAQGF
IDCGFSILATGGTYDRIVKHGIPAEKIHKLGKGRPDILDAIANGQIDIIVNTPIDKKGAD
DDSYIRKAAIRARISYVTTMAAAKATIAGIKEIKFNKAAKVHSLQELHSQIQDKE
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcggacagacattcacaaggtattaattataggatcgggacctattgttatc
ggacaagcatgtgaattcgattattcaggtacccaggcatgtaaagctctaaaaaaatta
gggtataaggttattttagttaattcaaaccctgcaactattatgacagatactcaaact
gcagacgtaacctatatagagcctttgaatgtagaaagactgacctatattatagaaaaa
gagcggccagatgcacttcttcctaatctaggtgggcaatccggcctaaatttatgttca
gaacttgataaggcaggagtattaaaaaaatataatgttaaggtaatcggtgtacaggtt
gaagctattgaaaggggtgaagacagggttgaatttaaaaaaaccatggactcactgggg
atagagatggcaagaagtgaggttgcctattcggtagaagaagccttagccatagccgag
aaattatcttatccggttgtaattaggccggcttataccatgggcggcgcagggggcggc
ctggtatataatgtggatgagctaaaaaccgtagtctctaggggattacaggcaagtatg
gtaggccaggttttagttgaagagtctatactgggttgggatgagttggagctggagata
ataagagatgctgccggtaatatgataacggtatgctttattgaaaatatagatcctctc
ggtgtccatacaggagattccatttgctgtgcacctatgttgactattcctaaggaagtt
cagatggaacttcaaagacaggcctataaaattgtagatgcaattggtgtaataggtggt
accaatgtgcaatttgcctatgatcctgtaagcggcagaatatgcgtaattgaaataaac
ccaagaacctcccgttcatcggctttagcttctaaggctacaggttttcccatagcccta
gtttccgccatgttagcggcagggcttacccttaatgaaataccttgtggtaagtatgga
accttagataaatatgttccggatggggatcatttggttattaaatacgcccgctgggct
tttgaaaagtttaaaggggcaaaagatagactgggaactcagatgaaggctgtgggagag
gtaatgagtatcggaaaaacctataaagaggcctttttgaaagctatccgcagtcttgag
attggaaggtacggtcttggaaatataaataaatttgaggaaaaaaataaagaagagctt
cttgatatgcttcatattcccagcagtgaacgtcaatttattatgtatgaagccctaaaa
aagggagcaagtgtagaggagctttatgaattaacaaaaattaaaccatattttatccgg
cagatgaaagaacttgtggaagaagaggaaaatttaaagaaatatcaagggcagattccc
ccaaaagaagtattaagacaggctaaggaaaatggtttttctgataaatatctaagccag
attcttatgatagatgaagataccataagaaaggcaaggaaagaggctaatattacagcg
ggctggggaagtattcatgtaagcggtactgacaatgccaaatacttttattcctcctat
cacataaatgaagataaagaagctacatcttccaataaaaaggtgatgattttagggggc
ggtcctaaccgcataggtcaaggtatagaatttgattactgctgtgttcatgcggcattt
gcacttagggatatgggaatagaaacaattatagttaactgcaatcccgagactgtgtca
acggactatgatacatccgatagattatactttgaaccccttacagttgaggatgtactt
agtatttacgagaaagaaaaacctataggtgttattgctcagttcggaggacaaacccct
cttaatttggcggcacaattaaagaaaaacggagtcaatattttaggaaccacaccggag
actattgacttagctgaagatagggatagattccgtgaaatgatggataagcttaatata
cctatgccggagtccggtatggctaccaatttagatgaggctttacaaatagcaaaaaga
ataggatatccggttatggtaaggccctcatatgttttgggaggccgtggcatggagata
gtccatgatgatgaaagccttaagatttatatggaggctgctgtgggtgttacaccggat
aggcccattttaattgaccgtttcttgcacaatgccctagaatgtgaagctgatgctatt
agcgacggaaaacaggcatttgtaccggcagtaatggagcatatagaactggcgggaata
cattccggtgattcggcctgtgttataccatccttaaacataaagaaagagcatttagat
actataaaggaatatactgttaagattgcaaacgaaatggaagtctgtggacttatgaat
atgcaatacgccattgaggatgataaagtctatgtattagaggcaaatcccagggcttca
agaacggttcccttagtatctaaggtttgtgatatacaaatggttagactggccacagag
attatggtagcttcatttttaggagggccttctccggtccctgccttaaaagagaagaag
tttacccactacggagttaaggaagcggtatttccctttaatatgttcccggaagttgac
ccggttttaggtcctgaaatgcgctccacaggagaagtactgggcctggctcagtcattc
ggagaagcattttataaggcccaggaggccggtgatcacagtcttcctttatcgggaact
gtacttataagtgtaaatgacagggataaggaggaattaccggaagtggcacagggcttt
atagactgtggttttagcatccttgcaacagggggaacctatgacaggattgttaaacat
ggtattcctgcagaaaaaattcataagcttggcaaaggcagaccggatatattagatgct
attgccaatggccagatagatattattgtcaatactcccattgataaaaaaggagccgac
gatgacagctatatcagaaaggcagctattagggccagaataagctatgtaaccactatg
gctgcagctaaggcaactatagcaggaataaaggaaattaagtttaataaagcagcaaaa
gttcattctcttcaggagcttcatagtcaaatacaagataaagaataa
DBGET
integrated database retrieval system
