Herbaspirillum seropedicae SmR1: Hsero_0001
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Entry
Hsero_0001 CDS
T01268
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein
KO
K02313
chromosomal replication initiator protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_0001 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hse03032
]
Hsero_0001 (dnaA)
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_0001 (dnaA)
DNA replication proteins [BR:
hse03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hsero_0001 (dnaA)
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hsero_0001 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
Hda_lid
Arg_tRNA_synt_N
AFG1_ATPase
AAA_22
ATPase_2
TsaE
AFP_2
Motif
Other DBs
NCBI-ProteinID:
ADJ61531
UniProt:
D8ITP0
LinkDB
All DBs
Position
1..1398
Genome browser
AA seq
465 aa
AA seq
DB search
MENFWQACSQKLEQELTPQQYSAWIKPLVPLDYEDGLLRVAAPNRFKLDWVKTQFANRIT
ALACEYWDAPTEVQFVLDPRGNQGRRPAAAAAAGNGASGLGLPNHEQLHLDPEPAQPVRA
VAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTHII
HAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFGG
KSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELEMR
VAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVKEA
LKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKSL
PEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttttggcaggcctgctctcaaaaacttgagcaggagctgacaccccagcaa
tacagcgcctggatcaagcccctggtgccgctcgactacgaagacgggctgctgcgcgtg
gccgcgcccaatcggttcaagctggactgggtcaagacccagttcgccaaccgcatcacc
gcgctggcctgcgagtactgggacgcgcccaccgaggtgcaattcgtgctcgacccgcgt
ggcaaccagggccgtcgtccggcggcggccgccgcggccggcaatggcgccagcggtctg
ggtttgcccaatcacgagcaattgcacctggaccccgaaccggcccagccggtgcgcgcg
gtcgcgccgcgccaggagcagtcgcgtatcaacccggtgttgaccttcgacaatctggtg
acgggtaaggccaaccagcttgcccgcgcagccgccacccaggtggccaacaaccccggc
acgtcctacaacccgctgttcctgtacggcggcgtcggcctgggtaagacccacatcatc
cacgccatcggcaaccaggtgcttgtggataacccgggcgcgaaaatccgctacatccac
gccgagcaatacgtgcgcgacgtcgtcacggcctaccagcgcaagggttttgacgacttc
aagcgttattaccactcgctggacctgctgctgatcgacgatatccagttcttcggcggc
aagagccgtacccaggaagagttcttctacgccttcgaagccctgatcgcggccaagaag
cagatcatcatcaccagtgatacctatcccaaggaaatcagcggcatggatgaccgcctg
atctcccgcttcgactcgggcctgacggtggccatcgagccgccggagctggaaatgcgg
gtagcgatcctgatgaagaaggcttccgccgaagacgtggtgctgtccgatgacgtcgcc
ttcttcgtggccaagcacctgcgctccaacgtgcgtgagctggaaggcgcgctgcgcaag
atcctggcctactcgcgcttccacggtaaggacatcaccatcgacgtggtcaaggaagcc
ctgaaagacctgttgtcggtgcagaaccgccagatctcggtggaaaacatccagaagacg
gtggccgacttcttcaacatcaaggtcgccgacatgtattccaagaagcgcccggccaac
atcgcccgcccgcgccagatcgccatgtacctggccaaggaactgacccagaagagcctg
ccggaaatcggcgacctctttggtgggcgcgaccacaccacggtgctgcacgcggtgcgc
aagatcgccgccgaccgcgccaagagcccggaatgcaaccacgagctgcacgtgctggag
cagaccctgaagggctga
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