Herbaspirillum seropedicae SmR1: Hsero_0126
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Entry
Hsero_0126 CDS
T01268
Symbol
rplE
Name
(GenBank) 50S ribosomal subunit L5 protein
KO
K02931
large subunit ribosomal protein L5
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Hsero_0126 (rplE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hse03011
]
Hsero_0126 (rplE)
Ribosome [BR:
hse03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
Hsero_0126 (rplE)
Bacteria
Hsero_0126 (rplE)
Archaea
Hsero_0126 (rplE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L5_C
Ribosomal_L5
Motif
Other DBs
NCBI-ProteinID:
ADJ61652
UniProt:
D8IUT3
LinkDB
All DBs
Position
139202..139741
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AA seq
179 aa
AA seq
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MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI
AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR
AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcttcaacagttttataaagataaggtcgtcgccgatctgactacgaagtat
tcgtacaagtcggtgatggaagttccgcgcatcctgaagatcaccctgaacatgggtctg
tccgaagcagttgcggataagaagatcatcgagcacgccgttggcgacctgaccaagatc
gctggtcagaagcccgtggtgaccaaggctcgtaaggctatcgctggtttcaagatccgc
gaaggctacccgatcggttgcatggtgaccctgcgtggcgcccgcatgtacgaattcctg
gatcgtctgatcaccgtggccctgccgcgcgtgcgtgacttccgtggtgtgtcgggtcgt
gcgttcgacggtcgtggcaactacaacattggtgtgaaagagcagatcatcttccccgaa
atcgagtacgacaagatcgatgcactgcgtggcatgaacatcagcatcaccacgactgca
aagaccgacgacgaagcgaaggcgcttctcgccgcatttaaattcccgttcagaaactga
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