Herbaspirillum seropedicae SmR1: Hsero_0170
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Entry
Hsero_0170 CDS
T01268
Symbol
cirA
Name
(GenBank) TonB-dependent heme/hemoglobin receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0170 (cirA)
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_0170 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADJ61696
UniProt:
D8IUX7
LinkDB
All DBs
Position
175903..177975
Genome browser
AA seq
690 aa
AA seq
DB search
MAIQRQLIATAVLSALATWSLAASAQTAAPAAPIDPAVSVTPAAPAAPAAAQPALQPIVV
TATPFGSQEDVQVLTPAKVIAGDELRNKLGNSLGETLSSELGVSASAFGAGASRPIIRGM
EGPRVMILQNGMGVSDVSTVSNDHAVATEAATARQIEILRGPAALLYGSGAIGGLVNVVN
DRIPTELVGKPTGTVEGRYGTVDGEKNTSFSLDTSAGQIGLHLDGNYRDTSDYKIPGNAR
QGDGSTASGRLPNSFTHESSVGLGASYVSNWGYVGVSAATLDDHYGIPTSELSFIDLHQN
RYDIDTVVNQPFAGIEKLRMRLGYTDYTHIEKQRDGTPDTVFSNRAVQTRWELTHAPLAG
WHGTFGVQTEQSNYSALSAATGAAELTPPTRSTSFAGFLVEERQFGQVLASAGLRGESVS
RRPDAGRQGRDFNLLSWSTGALWTFQPGYGLGLTYSLAQRAPTVEELYSNGPHESTSTFD
IGSSQLKKETSHNIELSLQKTEGLVRWKGNLFRNKVNNYIYGRTNGQVDDSGAADPNGEF
TQRFWSQADAAIRGAEAEVSYNWNGEGMSGRLFADTSRGTLDNLGNIPLQPATRYGVELG
YKTGPWASGMKVLRAQRQDRLASFETYATPSYTQVDANLSYTQKLNGVKLTWFALARNLL
NQDIRLSTSVLRETVPMGGRNFIVGARTSF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccaacgccaactcatcgccacggcggtgctctccgcactggctacctggtcg
ctggcggcctcggcccagaccgctgcgcctgctgcaccgattgaccctgctgtttcggtt
actcctgctgctcccgctgctcccgccgccgcccagccggcgctgcaacccatcgtcgtg
accgccacccccttcggttcgcaggaagatgtccaggtcctcaccccagccaaggtcatt
gccggcgacgagctgcgcaacaagctgggcaactcgctgggcgagacgctgtcctccgaa
ctcggtgtgtcggcctcggccttcggcgcaggtgcgtcgcgtcccatcatccgtggcatg
gaaggtccgcgcgtgatgatcctgcagaacggcatgggcgtctctgacgtctccaccgtc
tccaatgaccatgcagttgccaccgaagcggcgaccgcccgccagatcgagatcctgcgc
ggtccggcggcgctgctctatggatcgggcgccatcggcggcctggtcaacgtggtcaat
gaccgtatccccaccgagctggtgggcaagcccaccggtaccgtcgaaggccgctacggc
acggtcgatggtgaaaagaacacctccttctcgctggacacctcggctggccagatcggc
ctgcacctggatggcaactatcgcgataccagcgactacaagatccccggcaatgcccgc
cagggcgacggcagcacggcctcgggccgcctgcccaactcgtttacgcatgaatccagc
gtcggcctgggcgcgtcctatgtgagcaactggggttatgtaggcgtgtctgctgctacg
ctggacgatcactacggcatccccaccagcgagctgtccttcatcgatctgcaccagaac
cgctacgacatcgacaccgtggtcaaccagcccttcgccggcatcgagaaactgcgcatg
cggctgggctataccgactacacccacatcgagaagcaacgcgacggcacccccgatacc
gtgttttccaatcgcgccgtgcagacccgctgggaactgacgcacgcgcccctggcggga
tggcatgggaccttcggcgtgcagaccgagcagagcaactactcggccctgtcggccgcc
actggcgcagcagagctgaccccgccgacccgctcgacctcgtttgccggcttcctcgtg
gaagagcgccagttcggccaggtgctggccagcgccggcctgcgcggcgagagcgtgagc
cgccgtccggatgccggcaggcagggacgcgacttcaacctcctgtcctggtccaccggc
gcgctatggaccttccagcccggctatggcctgggcctgacctactcgctggcgcagcgt
gcgccgacggtagaggagctgtattccaatggtccgcatgaatcgacttccaccttcgac
atcggcagcagccagttgaagaaggaaacctcccacaacatcgaactgagcctgcagaag
accgaaggcctggtgcgctggaagggcaacctgttccgcaacaaggtcaacaactacatc
tacggtcgcaccaacggccaggtcgatgacagcggcgcggccgatcccaatggtgaattc
acccagcgcttctggtcgcaggccgatgccgccatccgtggtgcggaagccgaggtcagc
tacaactggaacggtgaaggcatgtcgggccgcctgttcgccgatacctcacgcggcacc
ttggacaacctgggcaacatccccctgcaacccgccacccgctatggcgtcgaactgggc
tacaagaccggcccctgggccagcggcatgaaggtgctgcgggcgcagcggcaggaccgg
ctggcgtccttcgagacctatgccacgccgtcctatacccaggtcgatgccaacctgtcc
tatacccagaagctcaatggcgtgaagctgacctggttcgcgctggcgcgcaacctgctc
aaccaggacatccgcctgtccacctcggtgctgcgcgaaaccgtgccgatgggtgggcgc
aatttcatcgtgggtgcgcgcaccagcttctga
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