Herbaspirillum seropedicae SmR1: Hsero_0172
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Entry
Hsero_0172 CDS
T01268
Name
(GenBank) AraC family transcription regulator protein
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_0172
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hsero_0172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
Cupin_2
Cupin_3
HTH_23
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ADJ61698
UniProt:
D8IUX9
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Position
178794..179765
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AA seq
323 aa
AA seq
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MDALSHLLFLHPVRAALDIRCRFGQPWHLQNAAQPQGTAPYHFILEGQAQLQWGAGEPLA
LQAGDLVVLVRGAAHGLFTAPAAQAAAVRVASTTAPVALHVNGQAGEGAPALSDFLCGQF
TFDAPHSHALMQALPDLLWIRGAELPEGHGLRTLATLLRDECGGSEGIDAIEARPGAQAV
VASLAAALFGLAVRAWLAQSGPTPGLLALLAHPLLHKAMQAMLKAPAEDWSLPRLAALCH
MSRATFIRRFAEVGASTPAQVLMQLRMAQAARLLSYSKQATAQIGEAVGYQSEAAFNRVF
RKYSGMGPGAYRRQARAAGEGQQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcagtcacctgctgttcctgcacccggtgcgcgccgcactggatatccgc
tgccgcttcggccagccctggcatctgcagaatgccgcccagcctcagggaaccgcgccc
tatcacttcatcctcgaaggccaggcgcagctgcaatggggcgctggcgagccgctggcg
ctgcaggccggcgacctggtcgtgctggtgcggggtgcggcgcatggcctgttcaccgcc
ccggcggcgcaggctgcggcggtgcgggtggccagcacgaccgcgcccgtggccttgcat
gtcaacgggcaagcaggagagggggcccctgccttgtccgatttcctctgtggacaattc
actttcgatgcgccgcactcccatgccctgatgcaggccttgcccgacctgctctggata
cgtggggccgagctgcccgagggccatggcttgcgcaccctggctacgctgttgcgcgac
gaatgcggcggcagtgagggtatcgatgctatcgaggcccggcccggcgcccaggcggtg
gtggccagtctggcggcggcgctgttcggactggccgtgcgcgcctggctggcccagtcc
ggacccacgccgggtttgctggccctgctcgcccacccgctgctgcacaaggccatgcag
gcgatgctgaaggcgcccgccgaagactggtcactgccgcgtctggcggccttgtgccat
atgtcgcgggcgaccttcatccggcgcttcgcagaagtcggcgccagcacgcccgcccag
gtgctgatgcaattgcgcatggcccaggccgcgcgcttgttgagctacagcaaacaggcc
acggcgcagatcggcgaagctgtgggatatcagtcggaggcggccttcaaccgggtcttc
cgcaaatacagcggcatggggccgggtgcataccggcgccaggcgcgtgcagcaggcgaa
gggcagcaatag
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