Herbaspirillum seropedicae SmR1: Hsero_0199
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Entry
Hsero_0199 CDS
T01268
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase protein
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsero_0199 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_0199 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_0199 (aspS)
03029 Mitochondrial biogenesis [BR:
hse03029
]
Hsero_0199 (aspS)
Enzymes [BR:
hse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Hsero_0199 (aspS)
Amino acid related enzymes [BR:
hse01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Hsero_0199 (aspS)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hsero_0199 (aspS)
Prokaryotic type
Other AARSs
Hsero_0199 (aspS)
Mitochondrial biogenesis [BR:
hse03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Hsero_0199 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADJ61725
UniProt:
D8IV06
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All DBs
Position
211267..213066
Genome browser
AA seq
599 aa
AA seq
DB search
MRTQYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRADVFKNA
ESVRNEFCLRITGLVRNRPEGTTNANLKSGKIEVLCHELEVLNPSVTPPFQLDDDSLSET
TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP
SRVNAGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFL
NEQEIRDLFEGMIRLVFKNALDIDLPNPFPVMDFATAMGKYGSDKPDMRVKLEFTELTDV
MKDVEFKVFSGAANSEGGRVVGLRVPGGAEMPRSEIDAYTQFVAIYGAKGLAYIKVNEKA
KGRDGLQSPIVKNIHDAALNAILEKTGAQDGDLIFFGADKAKVVNDAIGALRVKIGHSEF
GKKNGLFDDAWRPLWVVDFPMFEYDEDGQRWVALHHPFTSPKDGHEDFISTNPGAAIAKA
YDMVLNGWELGGGSVRIHRADVQSKVFRALKIDDEEAKLKFGFLLDALQYGAPPHGGIAF
GLDRLVTMMAGAESIRDVIAFPKTQRAQCLLTHAPSEVDEKQLRELHIRLRNTEPAVKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacccaatactgtggcctcactaccgaggcactgctcggccaaaccgtcagcctg
tgcggctgggtgcatcgtcgccgcgatcacggcggcgtcatcttcatcgacctgcgcgac
cgcgaaggcttagtccaggtggtctgcgatcccgatcgcgccgatgtcttcaagaacgcc
gaatcggtgcgcaacgaattctgcctgcgcatcacgggcctggtgcgcaaccgtccggaa
ggcaccaccaacgccaacctgaagtcgggcaagatcgaagtgctgtgccacgaactggaa
gtgctgaacccgtcggtgacgcccccgttccagctcgatgacgacagcctgtcggaaacc
acccgcctgacccaccgcgtgctggacctgcgccgtccgcagatgcagaacaacctgcgc
ctgcgctacaaggtcgccatggaagtgcgcaagttcctggacgcccagggcttcatcgac
atcgaaaccccgatgctgaccaagtccaccccagaaggcgcgcgcgactacctggtgccc
tcgcgcgtgaacgccggcgaattcttcgccctgccgcaatcgccccagctgttcaagcag
ctgctgatggtggccaacttcgaccgctactaccagatcaccaagtgcttccgcgacgaa
gacctgcgtgctgaccgccagccggaattcacccagatcgactgcgaaacctccttcctg
aacgaacaggaaatccgtgacctgttcgaaggcatgatccgcctggtcttcaagaacgcg
ctggatatcgacctgcccaaccccttcccggtgatggacttcgccaccgccatgggcaag
tatggttcggacaagccggacatgcgcgtcaagctcgaattcaccgagctgaccgacgtg
atgaaggatgtcgagttcaaggtcttctcgggcgccgccaacagcgaaggcggccgcgtg
gttggcctgcgcgtgccgggcggtgcagaaatgccgcgttcggaaatcgacgcctacacc
cagttcgtcgccatctacggcgccaagggcctggcctacatcaaggtcaatgaaaaggcc
aagggccgtgacggcctgcagtcgcccatcgtcaagaacatccacgacgccgccctgaac
gccatcctggaaaagaccggcgcgcaagacggcgacctgatcttcttcggcgccgacaag
gccaaggtggtcaacgatgccatcggcgcgctgcgcgtgaagatcggccacagcgaattc
ggcaagaagaacggcctgttcgacgacgcatggcgtccgctgtgggtggtcgacttcccc
atgttcgaatacgacgaagacggccagcgctgggttgccctgcaccacccgttcacctcg
cccaaggatggccacgaagacttcatctcgaccaacccgggtgcagccatcgccaaggcc
tacgacatggtcctgaacggttgggaactgggcggcggttcggtccgtatccaccgcgcc
gacgtgcagagcaaggtgttccgcgccctgaagatcgatgacgaagaagccaagctgaag
ttcggcttcctgctggacgccctgcaatacggcgcgcccccgcacggcggcatcgccttc
ggcctggaccgtctggtcaccatgatggcgggtgccgaatcgatccgtgacgtgatcgcc
ttccccaagacccagcgtgcacagtgcctgttgacgcatgctccttcggaagtggatgag
aagcagctgcgtgagttgcatattcgtctgcgcaatactgagccggcggtgaagagctga
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