Herbaspirillum seropedicae SmR1: Hsero_0248
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Entry
Hsero_0248 CDS
T01268
Name
(GenBank) TPR repeat containing, SEL1 subfamily, protein
KO
K07126
uncharacterized protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Hsero_0248
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Gene cluster
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Motif
Pfam:
DUF6396
Sel1
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ADJ61774
UniProt:
D8IV55
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Position
complement(253437..254993)
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AA seq
518 aa
AA seq
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MNDFTRNMPLAAFDPHSREFSCKYEKDSEPILDEQAEDWFREGMAVTSNDLWPDDRDYKR
AASLWKKAAQKNHWKAMLNLAGLYLDGRGILRDTEQAVVLVEDAMKMGVPRAYELMGRYH
MNGTGVQQNATRAYAFWALAANLGDAEAQAYLGGKLNATYDDANGSFWGNKSIALQMLRC
SYAQENAEASLNLGVSLNVNGKYEDALNILHDGVRFGSKGSANYLAASFLIHTELTGQHV
DQDRAERYKAIGDLLRLNPDLRLPNLDKVLPLPPAVLPYWDGDKQTLIDGAKPVKTASLD
DIKPSPASLRQGRAHIPDGLVLPDEPQGGHLIQHLHTDAIISGFWLAQLAKPYTPKQVAW
NAAQVPMYYALGESFTAPEDITKDDGVLRFHYLGTPIPKSLAERYVPDWRVPQGVLREVP
VPSRELRSSGLLPAPATGIWHGTIDPAHSLSKVFNLWTRQAYVEEGQSFPDPRERGLDIS
PKDIQWQWLDQANQPLPSGRKDITIRNFDPADTAKNHP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactttactcgtaatatgccactggcagccttcgatcctcactcaagggagttt
tcctgcaaatatgagaaagatagcgaacccatccttgatgagcaagctgaagactggttc
cgggagggaatggccgttaccagcaatgacttgtggccggacgacagagactataagaga
gctgcctccttatggaagaaagcagcacagaaaaaccactggaaggcaatgctgaacttg
gccggactctacttggacggccggggaatcttgcgagatactgaacaagcagttgttctt
gtcgaagacgccatgaaaatgggcgtccccagagcttacgaattaatgggccggtaccac
atgaacggcactggcgtgcaacagaacgcaacacgcgcctatgcgttctgggcccttgcc
gccaatctgggcgatgcagaagctcaggcatatctgggcggcaaactcaatgcaacttac
gacgatgccaatggctcgttttggggcaataaatctatcgctcttcaaatgctccgttgt
agctacgcgcaggaaaatgctgaagccagcttgaatctaggtgtgagtttgaacgtcaat
ggaaagtacgaggacgccctaaatatcttgcatgatggagtcagatttggaagcaagggc
agcgcgaactatctggcagccagtttcttgatccatacagaactaaccggacagcacgtt
gaccaagatcgagccgagcgctacaaggccatcggagatctgctccgcctcaaccccgac
ctccgcctccccaacctcgacaaggttctccctcttcctcccgcggtcctcccctattgg
gatggcgacaagcagaccctgatcgatggcgccaagcccgtcaaaacagcctcactggat
gacatcaagccctctcccgcctcgctgcgtcagggccgcgctcatatccccgatggactt
gtcctccctgacgagccgcaaggtggccacctgatccagcatctgcacaccgatgccatc
atcagcggcttttggctcgcccaattggccaaaccttacacacccaagcaagtcgcctgg
aatgctgcgcaggtaccgatgtactacgcgctgggcgaatccttcacagcccctgaagac
attacaaaagatgacggcgttcttcgtttccactatctcggcacacccattccaaaatct
ctagcagaacgatatgtccctgactggcgtgtgccacaaggtgtgctgcgtgaggtcccc
gttccttctcgcgagttacgctccagcggcttactccctgcacctgctacgggtatctgg
catgggaccatcgatccggcccattctctgagcaaggtcttcaacttgtggacgcgccag
gcctacgtggaagaaggtcaatccttccctgatccacgtgagcgtggcttggatatttcc
ccgaaagatatccagtggcaatggctcgatcaggcaaatcagcctctgccatcggggcgc
aaggacatcaccatccgtaacttcgatcctgctgacacagcaaaaaatcatccctag
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