Herbaspirillum seropedicae SmR1: Hsero_0357
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Entry
Hsero_0357 CDS
T01268
Symbol
pilB
Name
(GenBank) ATPase PilB protein
KO
K02652
type IV pilus assembly protein PilB
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hse02044
]
Hsero_0357 (pilB)
02035 Bacterial motility proteins [BR:
hse02035
]
Hsero_0357 (pilB)
Secretion system [BR:
hse02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Hsero_0357 (pilB)
Bacterial motility proteins [BR:
hse02035
]
Pilus system
Pilus assembly proteins
Hsero_0357 (pilB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
AAA_30
AAA_11
AAA_7
DEAD
HerA_C
AAA_22
AAA_19
AAA_29
RuvA_C
AAA
nSTAND3
Mg_chelatase
ResIII
AAA_14
ATPase
Motif
Other DBs
NCBI-ProteinID:
ADJ61883
UniProt:
D8IW85
LinkDB
All DBs
Position
complement(392892..394025)
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AA seq
377 aa
AA seq
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MQASETPLADDVPVVRLLYKLLADAVSMGASDLHFEPFEHYCRVRLRIDGILHELAQPPL
SLKDKLATRLKILARLDIAEKRLPQDGKMRLALETRTVDFRVSTLPTQFGEKIVLRILDT
EQATLALEQLGYEPAQLQALQQAIARPHGMVLMTGPTGSGKTVSLYACLQRLNRPGINIA
TAEDPVEINLPGINQVSINERAGLNFAVALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQ
TGHLVLSTLHTNDAPATLTRLLNMGVPAYNIAASVSLIVAQRLVRRLCSCRRPARDASGS
FVPHGCPACSHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGL
LKALRGDTSLGEVLAST
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttccgagactcccctggccgacgacgtccctgtcgtgcggctcttgtacaag
ctcttggctgatgccgtcagcatgggcgcatcggacctgcatttcgaacccttcgaacat
tattgccgggtgcgcctgcgcatcgacgggatactgcatgagctggcgcagccgccgctg
agcctgaaggacaagctggcgacccggctcaagatcctggcgcgactggatatcgccgaa
aagcgcctgccccaggatggcaagatgcgcctggccctggaaacccgcacagtggacttt
cgcgtctcgaccctgcccacgcagttcggcgagaagatcgtgctgcgcatcctcgacacc
gagcaggccaccctcgcgctggaacagctgggctacgagccggcccagctgcaggcgctg
caacaggccatcgcacggccgcatgggatggtgctcatgaccggccccaccggctcgggc
aagacggtctcgctgtatgcctgcctgcagcggctgaaccgtccaggcatcaacatcgcc
actgccgaggatccggtcgagatcaacctgcccggcatcaaccaggtcagcatcaacgaa
cgcgccggactgaactttgcggtggcgctgcgggccttcctgcggcaggatccggacgtg
ctgatggtgggcgagatccgcgacctcgacaccgccgacatcgccatcaaggccgcgcag
accggccatctggtgctctccaccctgcataccaatgacgccccggccacgctcacgcgc
ctgctcaacatgggcgtgccggcctacaacatcgccgcctcggtcagcctgatcgtggcc
cagcggctggtgcgcaggctgtgcagctgccgccgcccggcgcgcgacgcgtcgggcagc
ttcgtgccgcatggctgtccggcatgcagccataccggctatcgcggtcgcaccggcatc
taccaggtcatgccggtcagcgccacgatgcagtcgctgatccaggcccaggccggcacc
caggatatcgcccggcaggcccgcgccgagggtgtcatcgacctgcgccgcgccggcctg
ctcaaggccttgcgcggcgacaccagcctgggagaagtccttgccagcacctga
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