Herbaspirillum seropedicae SmR1: Hsero_0363
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Entry
Hsero_0363 CDS
T01268
Symbol
ispB
Name
(GenBank) octaprenyldiphosphate synthase protein
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00900
Terpenoid backbone biosynthesis
hse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Hsero_0363 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hse01006
]
Hsero_0363 (ispB)
Enzymes [BR:
hse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
Hsero_0363 (ispB)
Prenyltransferases [BR:
hse01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Hsero_0363 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
HxlR
Motif
Other DBs
NCBI-ProteinID:
ADJ61888
UniProt:
D8IW90
LinkDB
All DBs
Position
complement(396783..397712)
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AA seq
309 aa
AA seq
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MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI
EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME
IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI
EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE
LVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLLEL
SAFAVDRNH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcaacgcagtcatccgccggcagctgtattcggaagtgccgttggtcaac
caggtcgccgaatacatcatcagtgcgggcggcaagcgcctgcgcccggtgctggtggtg
ctcatcgccaacgccttcggctacaagggtgaacaccatcactcgctggcggcggtgatc
gaattcatccacaccgccaccctgctgcatgacgacgtggtggacgagtcttccttgcgg
cgcggcaagcagaccgccaacgccatgttcggcaacgccgcttcggtgctggtgggcgac
ttcctgtattcgcgcgccttccagatgatggtcgccgtgggcaatcctcgcgtgatggaa
atcgtggccgacgccaccaacgtcatcgccgagggcgaagtgctgcagttgctcaacatg
cacaatcccgacgtggacgagaacggctacctgcaggtgatccgctccaagaccgccaag
ctgtttgaagccgccagccagatcggcgcgctcatcgctggcgccgacgaggccggcatc
gaagccgccgccgaatatggccgttccatcggcaccgccttccagttgatcgacgacgtc
ctggactattccggcaacagcgccgagatcggcaagaacgtcggcgacgacctgcgcgaa
ggcaagcccaccctgccgctgatctggctgatgcagcacggcacgccgcaacaacgcgaa
ctggtgcgtacctgcatcgagaatggcgacgagcagcatttcgacgaagtgctgtcggcc
atcacccattcgggcgcgctggcctatacccgcgaacaggcggaaatcgccgcccgccgg
gcagccgacgcaattatttcacttccggatagccaattcaaaaaatccctgttagaatta
tcggctttcgcagtagatcgaaatcactga
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