Herbaspirillum seropedicae SmR1: Hsero_0369
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Entry
Hsero_0369 CDS
T01268
Symbol
rppH
Name
(GenBank) dinucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hsero_0369 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hse03019
]
Hsero_0369 (rppH)
Messenger RNA biogenesis [BR:
hse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Hsero_0369 (rppH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
GAIN_A
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ADJ61894
UniProt:
D8IW96
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All DBs
Position
complement(401917..402501)
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AA seq
194 aa
AA seq
DB search
MLDREGFRPNVGIILLNANNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL
RAEHVKIIGRTRDWLRYEVPDHFIKREVRGHYRGQKQIWFLLRMVGRDCDVNLRGTSHPE
FDAWRWHDYWVPLDVVIEFKREVYQQALQELSRFLNRPGQGARRHEPTARALPAHKKPAA
SGLPPNAAPAPEPK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcgagaaggcttccgcccgaacgtcggcatcatcctgctcaacgccaataac
gaggtgtggtggggcaagcgcgtgcgcgagcactcctggcaattcccgcaaggcggcatc
aagcacggcgagacccccgaacaggcgatgttccgggaactggaagaagaaatcggcctg
cgcgccgagcacgtgaagatcattggccgcacccgtgactggctgcgctatgaagtcccc
gatcatttcatcaagcgcgaagtgcgcggccattaccgcggccagaagcagatctggttc
ctgctgcgcatggtcgggcgcgactgcgacgtcaacctgcgcggcacctcgcatccggag
ttcgatgcctggcgctggcatgactactgggtgccgctggacgtggtgatcgagttcaag
cgcgaggtctaccagcaggcgctgcaggaattgtcgcgcttcctgaaccggcccggccaa
ggtgcgcgccgccatgagccgaccgcgcgcgccctgcccgcccacaagaaaccggccgcc
agcggcctgccccccaatgcggcgcctgcgcccgaacccaagtga
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