KEGG   Herbaspirillum seropedicae SmR1: Hsero_0380
Entry
Hsero_0380        CDS       T01268                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside reductase (large chain) oxidoreductase protein
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00230  Purine metabolism
hse00240  Pyrimidine metabolism
hse01100  Metabolic pathways
hse01232  Nucleotide metabolism
Module
hse_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
hse_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:hse00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Hsero_0380 (nrdA)
   00240 Pyrimidine metabolism
    Hsero_0380 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hse03400]
    Hsero_0380 (nrdA)
Enzymes [BR:hse01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Hsero_0380 (nrdA)
DNA repair and recombination proteins [BR:hse03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Hsero_0380 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone Viral_DNA_bp
Other DBs
NCBI-ProteinID: ADJ61905
UniProt: D8IWA7
LinkDB
Position
412791..415775
AA seq 994 aa
MRSTQEISVKSPAAYGVSAELEGSAESQAVASQTAGLGEYRIIRRNGAVVGFEPSKISIA
VTKAFLAVNGGQGAASARVREMVEQLTTNVVSALVRRQPTGGTFHIEDIQDQVELALMRS
GEHDVARAYVLYRAKRMEERAQQGAATKTEVVAPQLHVTEDGQSRPLDINEVRSLIAAAC
VGLEEHVDGEAILAETVKNLYDGVPVEELYKSAILAARALMEKDPAYSQVTSRLLMHTIR
KEVFGKEVAQADAPAEYLEYFPQYVKKGIEAELLDTKLAQFDLAKLAAALKPERDLQFGY
IGLQTLYDRYFLHIGGTRIEMPQAFYMRVAMGLALNEIDRETRAIEFYDLLSSFDFMSST
PTLFNSGTQRSQLSSCYLTTVADDLDGIYEAIKENALLAKFAGGLGNDWTPVRALGAHIK
GTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFLELRKNTGDDRRR
THDMNTANWIPDLFMKRVMEKGEWTLFSPSDTPDLHDKFGRAFEEAYTAYEAKAARGELK
LFKKVQANDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS
EIAVCNLGSVNLPAHLVNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRP
VGMGIMGFQDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSL
WDRGILPQDSLKLLAQERGGYLETDSTETLDWAALRARIAEHGMRNSNCVAIAPTATISN
IIGVSACIEPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKI
DRIPQDLRDIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWL
RGLKTTYYLRTIGATHTEKSTSRAGALNAVAVDGGAGAMASASGTAVPAAPIASAATASA
AYVMPNPGAAIEADGPVCTMRPGDAGFEECEACQ
NT seq 2985 nt   +upstreamnt  +downstreamnt
gtgcgctcaacccaagaaatttccgtcaaatctcctgccgcctatggcgtttccgccgag
ctggaaggctccgctgaaagccaggccgttgcttcccagaccgctggcctgggcgaatac
cgcatcatccgccgcaatggcgccgtggtcggtttcgaaccctccaagatttccatcgcc
gtgaccaaggccttcctggccgtcaacggcggccagggtgcggcttcggcgcgcgtgcgc
gagatggtcgagcaactgaccaccaacgtggtctcggcgctggtgcgccgccagcccacc
ggcggaactttccacatcgaagacatccaggaccaggtcgagctggccctgatgcgttcg
ggcgagcatgacgtggcgcgcgcctacgtgctctaccgcgccaagcgcatggaagagcgc
gcccagcaaggcgccgccaccaagaccgaagtggtcgcaccgcagctgcacgtgaccgaa
gacggccagagccgtccgctggacatcaatgaagtgcgctccctgatcgccgccgcctgc
gtcggcctggaagagcacgtcgacggcgaagccatcctggccgagaccgtcaagaacctg
tacgacggcgtgcccgtcgaagagctgtacaagtccgccatcctggctgcccgcgcgctg
atggaaaaggacccggcctacagccaggtgacctcgcgcctgctgatgcacaccatccgc
aaggaagtgttcggcaaggaagtggcccaggccgatgcaccggccgagtacctggaatac
ttcccgcaatacgtcaagaagggtatcgaagccgagctgctcgacaccaagctggcccag
ttcgacctggccaagctggccgccgccctcaagcccgagcgcgacctgcagttcggctat
atcggcctgcagaccctgtatgaccgctacttcctgcacatcggcggcacccgcatcgaa
atgccgcaggcgttctacatgcgcgtggccatgggcctggcattgaacgaaatcgaccgc
gaaacccgcgccatcgagttctatgacctgctgtcgtccttcgacttcatgagctcgacc
ccgaccctgttcaactcgggcacccagcgttcgcagctgtcctcctgctacctgaccacg
gtggccgacgacctcgacggcatctacgaagccatcaaggaaaacgccctgctggccaag
ttcgccggcggcctgggcaatgactggaccccggtgcgcgccctgggcgcccacatcaag
ggcaccaatggcaagtcgcaaggcgtggttcccttcctgaaggtggtcaacgacaccgcc
gtggcggtcaaccagggcggcaagcgcaagggcgcggtgtgcgcctacctggaaacctgg
cacatggacatcgaggaattcctcgaactgcgcaagaacaccggcgacgaccgccgccgc
acccacgacatgaacaccgcgaactggattcccgacctgttcatgaagcgcgtgatggaa
aagggcgagtggaccctgttctcgccgtccgacaccccggacctgcacgacaagttcggc
cgcgccttcgaagaagcctacaccgcctatgaagccaaggccgcccgcggcgagctgaag
ctcttcaagaaggtgcaagccaacgacctctggcgcaagatgctgtcgatgctcttcgaa
accggccacccgtggatcaccttcaaggatccctgcaacatccgttcgccccagcagcac
gtgggcgtggtccacagctccaacctgtgcaccgagatcaccctgaacaccaacgacagt
gaaatcgccgtctgcaacctgggttcggtgaacctgccggcgcacctggtcaatggcgag
ctggaccatgccaagctgcaaaagaccatccgcaccgccatgcgcatgctggacaacgtc
atcgacatcaactactacgccgtcaagaaggcccgtgactccaacctgcgtcaccgtccg
gtgggcatgggcatcatgggcttccaggactgcctgcacatcaagcgcgtgccgtacgcc
tcgatggacgccgtcgaattcgccgaccgctccatggaagccgtctgctactacgcctac
atggcctcgaccgaactggctgaagagcgcggccgttacgcttcctaccgcggttcgctg
tgggatcgcggcatcctgccgcaggattccctgaagctgctggcgcaagaacgcggcggc
tacctggaaaccgacagcaccgagaccctggactgggccgccctgcgcgcacgcatcgcc
gaacacggcatgcgcaactcgaactgcgtggccatcgccccgacggcgaccatctccaac
atcatcggcgtgtccgcttgcatcgagccgacctaccagaacctgtacgtgaagtcgaac
ctgtcgggcgaattcaccgagatcaacgagtacctggtgcgcgacctgaaggcccgtggc
ctgtgggacgaagtcatggttgccgacctcaagtatttcgatggcagcctggccaagatc
gaccgcatcccgcaagacctgcgcgacatctacgccaccgccttcgaagtggatccgtcc
tggctggtggaagccgcctcgcgtcgccagaagtggatcgaccaggctcagtcgctcaac
atctacatggccggcgcttccggcaagcgtctggatgagacctacaagctggcctggctg
cgcggtctgaagaccacctactacctgcgcaccatcggcgccacccacaccgagaagtcc
acttcccgtgcgggtgccttgaacgccgtggctgttgacggcggcgctggcgccatggcc
tcggcttccggtacggccgtgccggccgccccgatcgcttcggctgccactgcttcggcg
gcctacgtgatgccgaacccgggcgcggcgatcgaagccgacggtccggtctgcaccatg
cgtccaggcgatgccggtttcgaagagtgcgaggcctgccagtaa

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